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ProteomicsSARS-CoV-2 Envelope TurboID LFQ using internal tagging
SARS-CoV-2 is the causative agent of the Covid-19 pandemic. Here we investigated the cell biology of the SARS-CoV-2 protein Envelope (E). Envelope is a transmembrane protein that oligomerises to form a pentameric cation channel and is essential for high viral titres. One of SARS-CoV-2's four structu...
ORGANISM(S): Homo sapiens (Human) 
2024-02-27 | PXD045299 | Pride
Sars-cov-2 E Turboid Proximity biotinylation Lfq Envelope Bioid 
TranscriptomicsGene expression of triclosan susceptible and tolerant E. coli O157:H19 in response to triclosan exposure
Triclosan is a biocidal active agent commonly found in domestic cleaning products, hand sanitizers, cosmetics and personal care products. It is used to control microbial contamination and has a broad-spectrum of activity against many Gram-positive and Gram-negative bacteria. The development of tricl...
ORGANISM(S): Escherichia coli O157:H7 
2013-10-15 | E-GEOD-39343 | biostudies-arrayexpress
TranscriptomicsIdentification of m6A methylation-related genes in cerebral ischemia-reperfusion of Breviscapus therapy based on bioinformatics method
Abstract Background: Cerebral ischemia-reperfusion (I/R) frequently caused the late-onset neuronal damage. Breviscapine has a promote in autophagy of microvascular endothelial cells in I/R and it can inhibit the oxidative damage and apoptosis. However, the mediation mechanism of breviscapine on neur...
ORGANISM(S): Mus musculus 
2024-05-17 | E-MTAB-13017 | biostudies-arrayexpress
TranscriptomicsPredicting the efficacy of anthracyclines in breast cancer (BC) patients: The results of the TOP trial
PURPOSE: Validated biomarkers predictive of response/resistance to anthracyclines in breast cancer are currently lacking. The neoadjuvant TOP trial, in which patients with estrogen receptor (ER)-negative tumors were treated with anthracycline (epirubicin) monotherapy, was specifically designed to ev...
ORGANISM(S): Homo sapiens 
2010-01-26 | E-GEOD-16446 | biostudies-arrayexpress
UnknownDefects in ER-endosome contacts impact lysosome function in hereditary spastic paraplegia.
Not available
S-EPMC5412567 | biostudies-literature
UnknownExpression of pre-selected TMEMs with predicted ER localization as potential classifiers of ccRCC tumors.
Not available
S-EPMC5015219 | biostudies-literature
TranscriptomicsStudy of Cj1501 function in Campylobacter jejuni
In order to study the function of the Campylobacter jejuni Cj1501 gene, a series of experiments were carried out. Three strains were constructed: a Cj1501 knockout strain, a strain where the Cj1501 knockout was complemented in trans, and a strain with a second copy over-expressing Cj1501 from an fdx...
ORGANISM(S): Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 
2012-07-01 | E-GEOD-35016 | biostudies-arrayexpress
UnknownDistinct responses to non-autonomous UPR<sup>ER</sup> mediated by glutamatergic and octopaminergic neurons.
Not available
S-EPMC12644781 | biostudies-literature
UnknownA hag mutant of Moraxella catarrhalis strain O35E is deficient in hemagglutination, autoagglutination, and immunoglobulin D-binding activities.
Not available
S-EPMC128162 | biostudies-literature
TranscriptomicsGlobal gene expression analysis of the phytopathogen Xylella fastidiosa at high iron availability
Xylella fastidiosa is the etiologic agent of a wide range of plant diseases including citrus variegated chlorosis (CVC), a major threat to the Brazilian citrus industry. Genome sequences of several strains of this phytopathogen are accessible, enabling large-scale functional studies. Transcript leve...
ORGANISM(S): Xylella fastidiosa 
2007-09-01 | E-GEOD-5886 | biostudies-arrayexpress
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