Sort   by:  
 Page size 
Plasmodesmata are cytosolic bridges, lined by the plasma membrane and traversed by endoplasmic reticulum, connecting cells and tissues, and critical for many aspects of plant biology. While plasmodesmata are notoriously difficult to extract, tissue fractionation and proteomic analyses can yield valu...
ORGANISM(S): Physcomitrella patens subsp. patens (Moss) Arabidopsis thaliana (Mouse-ear cress) 
2023-01-13 | PXD038964 | Pride
Phyloproteomics analysis of phosphorylation sites across 49 bacterial strains from 48 species; 1~3 biological replicates. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) Bacteroides Thetaiotaomicron Vpi-5482 (ncbitaxon:226186) Bacteroides Fragilis 638r (ncbitaxon:862962) Myxococcus Xanthus Dz2 (ncbitaxon:1198133) Rhodopseudomonas Palustris (ncbitaxon:1076) 
2025-04-23 | MSV000097700 | MassIVE
Phyloproteomics analysis of acetylation sites across 49 bacterial strains from 48 species; 1~3 biological replicates. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) Bacteroides Thetaiotaomicron Vpi-5482 (ncbitaxon:226186) Bacteroides Fragilis 638r (ncbitaxon:862962) Myxococcus Xanthus Dz2 (ncbitaxon:1198133) Rhodopseudomonas Palustris (ncbitaxon:1076) 
2025-04-22 | MSV000097692 | MassIVE
Phyloproteomics analysis of tri-methylation sites across 49 bacterial strains from 48 species; 1~3 biological replicates. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) Bacteroides Thetaiotaomicron Vpi-5482 (ncbitaxon:226186) Bacteroides Fragilis 638r (ncbitaxon:862962) Myxococcus Xanthus Dz2 (ncbitaxon:1198133) Rhodopseudomonas Palustris (ncbitaxon:1076) 
2025-04-24 | MSV000097716 | MassIVE
Phyloproteomics analysis of di-methylation sites across 49 bacterial strains from 48 species; 1~3 biological replicates. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) Bacteroides Thetaiotaomicron Vpi-5482 (ncbitaxon:226186) Bacteroides Fragilis 638r (ncbitaxon:862962) Myxococcus Xanthus Dz2 (ncbitaxon:1198133) Rhodopseudomonas Palustris (ncbitaxon:1076) 
2025-04-23 | MSV000097706 | MassIVE
Phyloproteomics analysis of mono-methylation sites across 49 bacterial strains from 48 species; 1~3 biological replicates. Samples were digested with trypsin, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline.
ORGANISM(S): Bacillus Subtilis (ncbitaxon:1423) Bacteroides Thetaiotaomicron Vpi-5482 (ncbitaxon:226186) Bacteroides Fragilis 638r (ncbitaxon:862962) Myxococcus Xanthus Dz2 (ncbitaxon:1198133) Rhodopseudomonas Palustris (ncbitaxon:1076) 
2025-04-23 | MSV000097705 | MassIVE
We sampled global bottom up proteomics data from 48 diverse bacteria and searched for sites of lysine acetylation. Bacteria came from 6 phyla: proteobacteria, cyanobacteria, firmicutes, bacteroidetes, actinobacteria, and fibrobacteres.
ORGANISM(S): Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) Myxococcus xanthus DZ2 Streptomyces sp. Cellulophaga baltica 18 Faecalibacterium prausnitzii SL3/3 Bacteroides fragilis (strain 638R) Francisella tularensis subsp. novicida (strain U112) Cyanobacterium stanieri Algoriphagus marincola HL-49 Chryseobacterium indologenes Dorea longicatena DSM 13814 Rhodopseudomonas palustris Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) Acidiphilium cryptum (strain JF-5) Bacillus subtilis subsp. subtilis str. NCIB 3610 Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) Sulfobacillus thermosulfidooxidans unclassified Bacteria Rhodococcus sp. (strain RHA1) Fibrobacter succinogenes subsp. succinogenes S85 Bacillus subtilis subsp. subtilis str. 168 Micrococcus luteus (Micrococcus lysodeikticus) Streptomyces griseorubens Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia eutropha) Campylobacter jejuni Legionella pneumophila Streptococcus agalactiae Paracoccus denitrificans Mycobacterium smegmatis bacteria Alcaligenes faecalis Stigmatella aurantiaca (strain DW4/3-1) Citrobacter freundii Bifidobacterium bifidum DSM 20456 = JCM 1255 bacteria Pseudomonas putida KT2440 Coprococcus comes ATCC 27758 Ruminococcus gnavus ATCC 29149 bacteria Paenibacillus polymyxa ATCC 842 Bacillus cereus (strain ATCC 14579 / DSM 31) Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) Anaerococcus hydrogenalis DSM 7454 Delftia acidovorans (strain DSM 14801 / SPH-1) Lactobacillus casei subsp. casei ATCC 393 
2017-10-17 | PXD005851 | Pride
For the pulse-chase experiment, E. coli BW25113 and its isogenic delta prmA strains were grown in M9 minimal medium and L-Lysine-2HCl (13C6, 15N2) was added to cultures in exponential and stationary phase. The cells were cultured for an additional 2 hr and harvested. Proteins from the wild-type and ...
ORGANISM(S): Escherichia Coli Bw25113 (ncbitaxon:679895) 
2024-04-05 | MSV000094475 | MassIVE
Sort   by:  
 Page size