Polysaccharide - OmicsDI

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Unknown (8353)
Genomics (1133)
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Models (5)
Clinical (2)
Methylation profiling (1)

Organisms

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Ovis aries (3)
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human gut metagenome (3)
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Organisms

Mus musculus (49)
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mouse gut metagenome (9)
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feces metagenome (6)
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gut metagenome (5)
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Xanthomonas oryzae pv. oryzae KACC 10331 (3)
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Klebsiella pneumoniae subsp. pneumoniae (3)
Aspergillus fumigatus (3)
human gut metagenome (3)
Vitis vinifera (3)

Repository

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pride (137)
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Disease

Disease free (3)
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Technology Type

Mass Spectrometry (137)
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Affinity purification coupled with mass spectrometry proteomics (3)
SWATH MS (3)
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Top-down proteomics (2)
Illumina HiSeq 4000, ILLUMINA (1)
NMR spectroscopy assay (1)
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Instrument Platform

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Publication Date

2011 (86)
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2013 (65)
2010 (55)
2020 (54)
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2015 (47)
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2019 (41)
2018 (40)
2009 (40)
2016 (36)
2012 (35)
2017 (31)
2014 (31)
2008 (30)
2007 (22)
2006 (9)
2005 (6)
2004 (1)
2003 (1)

UNIPROT ID/AC

208964.PA4212 (1)
208964.PA4213 (1)
208964.PA4214 (1)
208964.PA4215 (1)
208964.PA4216 (1)
208964.PA4277 (1)
3MGH_PSEAE (1)
6PGL_PSEAE (1)
A2MGH_PSEAE (1)
AAT_PSEAE (1)
ACCA_PSEAE (1)
ACCC_PSEAE (1)
ACCD_PSEAE (1)
ACEA_PSEAE (1)
ACEK_PSEAE (1)
ACKA_PSEAE (1)
ACNA_PSEAE (1)
ACNB_PSEAE (1)
ACSA1_PSEAE (1)
ACSA2_PSEAE (1)
AGUA_PSEAE (1)
AHPF_PSEAE (1)
AK_PSEAE (1)
ALF_PSEAE (1)
ALG44_PSEAE (1)
ALGA_PSEAE (1)
ALGB_PSEAE (1)
ALGC_PSEAE (1)
ALGP_PSEAE (1)
ALGR_PSEAE (1)

CHEBI ID

CHEBI:52742 (1)
CHEBI:9254 (1)
CHEBI:30924 (1)
CHEBI:358 (1)
CHEBI:11018 (1)
CHEBI:45866 (1)
CHEBI:10961 (1)
CHEBI:18710 (1)
CHEBI:35397 (1)
CHEBI:15193 (1)
CHEBI:15671 (1)
CHEBI:26849 (1)
CHEBI:18711 (1)
CHEBI:35398 (1)
CHEBI:43896 (1)
CHEBI:62010 (1)
CHEBI:73803 (1)
CHEBI:11835 (1)
CHEBI:17871 (1)
CHEBI:20078 (1)
CHEBI:1552 (1)
CHEBI:34008 (1)
CHEBI:138881 (1)
CHEBI:28635 (1)
CHEBI:73804 (1)
CHEBI:10245 (1)
CHEBI:42748 (1)
CHEBI:22389 (1)
CHEBI:12321 (1)
CHEBI:48622 (1)

Metabolite Name

Guanine (14)
Guanosine (14)
Uridine (14)
Xanthine (12)
L-Tyrosine (12)
Uracil (11)
Taurine (11)
Adenosine (11)
Azelaic acid (11)
Adenine (11)
Inosine (11)
Cytosine (10)
L-Tryptophan (10)
L-Phenylalanine (10)
Hypoxanthine (10)
L-Arginine (9)
Xanthosine (9)
L-Glutamine (9)
Creatinine (9)
Citrulline (8)
L-Histidine (8)
Choline (8)
Malic acid (8)
Spermidine (8)
Raffinose (8)
Dodecanedioic acid (8)
Creatine (8)
L-Methionine (8)
Thymine (7)
Gabapentin (7)

First Public Date

2026 (173)
2024 (153)
2025 (149)
2014 (103)
2022 (82)
2023 (78)
2020 (71)
2013 (71)
2021 (64)
2019 (49)
2018 (37)
2017 (34)
2016 (24)
2015 (15)
2012 (5)
2011 (4)
2010 (2)

Modelling Approach

Constraint-based model (2)
Metabolic network (1)
Ordinary differential equation model (1)

Study status

Not provided (1)
Completed (1)

Lab affiliation

Department of Molecular Ecology MPI for Marine Microbiology Celsiusstr. 1 D-28359 Bremen Germany (6)
Faculty of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (6)
Department of Pharmaceutical Biotechnology, Institute of Pharmacy, University of Greifswald, Germany (3)
Laboratory of Enzymology and Molecular Biology (LEBIMO), Institute of Biology, University of Campinas (UNICAMP) (2)
Max Planck Institute for Terrestrial Microbiology Karl-von-Frisch Str. 10 35043 Marburg Germany (2)
1. School of Biosciences, The University of Melbourne, Melbourne, VIC 3010, Australia 2. Joint BioEnergy Institute and Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA (1)
Academy of Sciences of the Czech Republic Institute of Microbiology, v.v.i. Prague, Czech Republic (1)
Allergy and Clinical Immunology Unit, Meir Medical Center, Kfar Saba, Israel Faculty of Medical & Health Sciences, Tel Aviv University, Tel Aviv, Israel (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University of Munich (TUM) Gregor-Mendel-Strasse 4 85354 Freising (1)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technische Universität München (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Bielefeld University, Center for Biotechnology CeBiTec, (1)
Bio21 Institute, Melbourne Dental School, University of Melbourne (1)
Bioengineering, Protein Chemistry & Enzyme Technology, Technical Univesity of Denmark (DTU), Denmark (1)
Boston University School of Medicine (1)
CAS Key Laboratory of Experimental Marine Biology & Center of Deep Sea Research, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, China (1)
Cebitec, Bielefeld University (1)
Cellular Proteome Research Group, Helmholtz Centre for Infection Research (HZI), Braunschweig, Germany (1)
Center for Proteomics and Metabolomics, Leiden Universtity Medical Center, The Netherlands (1)
Centre for Biopharmaceutical Innovation The Australian Institute for Bioengineering and Nanotechnology The University of Queensland (1)
Centre for Microbiome Research, School of Biomedical Sciences, Queensland University of Technology (QUT), Translational Research Institute, Woolloongabba, QLD, Australia (1)
College of Pharmacy, Anhui University of Chinese Medicine, Hefei 230012, China (1)
Daegu Catholic University School of Medicine (1)
Deparment of Molecular and Cellular Biology University of Guelph Guelph, Ontario, Canada Department of Proteomics and Signal Transduction Max Planck Institute of Biochemistry Martinsried, Germany (1)
Department of Biochemistry University of Cambridge Cambridge UK (1)
Department of Biotechnology and Biomedicine, Technical University of Denmark, Søltofts Plads, 2800 Kgs. Lyngby, Denmark (1)
Department of Chemical Sciences, University of Naples Federico II, Strada Comunale Cinthia, 26 80126 Naples, Italy. (1)
Department of Chemistry, Biotechnology and Food Science Norwegian University of Life Sciences Post Office Box 5003 1432, Ås Norway (1)
Department of Environment and Biodiversity, University of Salzburg, Hellbrunnerstraße 34, 5020 Salzburg, Austria (1)
Department of Food Science and Technology, The Ohio State University, Columbus, OH, USA (1)
Department of Laboratory Medicine, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden. (1)

Keyword

Anti tumor necrosis alpha (1)
Pneumovax (1)
Pneumococcal vaccine (1)
Immunosuppression (1)
Heptavalent Pneumococcal Conjugate Vaccine (1)
UFT/LV (1)
PSK (1)
Adjuvant therapy (1)
Calcium, Dietary (1)
Leucovorin (1)
Calcium (1)
Levoleucovorin (1)

IsPrivate

False (5)

Model Flag

Non Kinetic (1)

Submitter Keywords

FROG (2)

Classification

bacteria (133)
fungi (21)

Modification

6x(2)H labeled dimethylated L-arginine (1)
Not available (1)

Study type

Transcription profiling by array (284)
RNA-seq of coding RNA (43)
Proteomic profiling by array (19)
Unknown experiment type (12)
Comparative genomic hybridization by array (12)
DNA-seq (3)
Other (2)
RNA-seq of total RNA (2)
Interventional (2)
ChIP-chip by tiling array (1)
High-throughput sequencing (1)
Human - One-color microarray (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (911)
2025 (842)
2023 (835)
2021 (741)
2024 (698)
2020 (599)
2019 (522)
2018 (485)
2017 (426)
2016 (360)
2015 (352)
2014 (304)
2011 (249)
2013 (235)
2012 (188)
2010 (167)
2026 (147)
2009 (137)
2008 (113)
2007 (84)
2006 (75)
2005 (46)
2004 (40)
2003 (37)
2002 (33)
2001 (31)
1999 (29)
2000 (26)
1998 (24)
1997 (1)

Location

United States (1)
Japan (1)

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Functional specialization of bacterial cellular and extracellular fractions contributes to polysaccharide degradation

Bacteroides thetaiotaomicron (Bt), a key commensal of the human gut microbiota, exhibits robust capacity to degrade dietary polysaccharides via carbohydrate-active enzymes (CAZymes). However, the exact spatial distribution and the functional coordination of these enzymes remain poor...

2026-03-27 | MTBLS14156 | MetaboLights

Lignocellulose adaptation drives polysaccharide biosynthesis in Tremella fuciformis: Metabolomic and proteomic insights into CAZyme regulation

The polysaccharide content of T. fuciformis grown on a Cyclobalanopsis substrate (TY3) was significantly higher than those grown on a mixed substrate (TF1) made of wheat bran and cottonseed hull. Metabolomics and proteomics were used to assess the effects of the lignoce...

2025-07-08 | MTBLS12694 | MetaboLights

Dendrobium officinale Polysaccharide Ameliorates High-Fat Diet-Induced Hepatic Lipid Metabolic Disorder via the SIRT6/PGC-1α Signaling Axis

Aims: This study aims to explore the potential therapeutic effect of Dendrobium officinale polysaccharide (DOP) on non-alcoholic fatty liver disease (NAFLD) induced by high-fat diet (HFD), and to elucidate the underlying mechanism involving the SIRT6/PGC-1α signaling axis and the regulation of the g...

2026-05-25 | MTBLS14575 | MetaboLights

Amomum longiligulare polysaccharide 1 supplementation promotes the proliferation of jejunal epithelial cells in piglets by regulating the cell cycle and intestinal metabolites

Although nonstarch polysaccharides often have growth-promoting effects in animals, little is known about how polysaccharides act when administered as feed additives. Here, we demonstrate that Amomum longiligulare polysaccharide 1 (ALP1) improves the growth performanc...

2024-08-01 | MTBLS9835 | MetaboLights

Strontium chelate with Achyranthes bidentata polysaccharide as a carrier promotes bone regeneration through mediating gut-liver-bone axis: The TD chicken model

This study investigates the effect of Achyranthes bidentata polysaccharide-strontium (ABPS-Sr) chelate on tibial dyschondroplasia (TD) in broilers and its underlying mechanisms. TD is a prevalent leg disorder in commercial broilers characterized by reduced angiogenesis in the tibial growth plate ...

2025-09-25 | MTBLS13045 | MetaboLights

Strontium chelate with Achyranthes bidentata polysaccharide as a carrier promotes bone regeneration through mediating gut-liver-bone axis: The TD chicken model

2025-09-24 | MTBLS13038 | MetaboLights

Extracellular Vesicles from probiotics mediated Walnut green husk polysaccharide alleviates ochratoxin-A-induced cognitive impairment via SCFA and 5-HT mediated microbiota-gut-brain axis

BACKGROUND: Ochratoxin A (OTA) have made it a serious hazard to food safety worldwide that poses a serious health risk to humans. Our previous research showed that Walnut green husk polysaccharides (WGP) can effectively alleviate intestinal inflammation and intestinal microbiota ...

2024-10-10 | MTBLS10673 | MetaboLights

Integrated pharmacological and metabolomic characterization of a polysaccharide-enriched fraction from Qingfei-Paidu Decoction for protection against acute lung injury in mice

The formula of Qingfei-Paidu Decoction was separated into a polysaccharide-enriched fraction (PSC) and an ethanol-soluble small-molecule fraction (EtOH), whose biological activities were systematically compared under equivalent crude drug conditions using an LPS-induced ALI mouse model and macrophag...

2026-10-05 | MTBLS15898 | MetaboLights

Gene expression profiling in equine polysaccharide storage myopathy

Standardized muscular biopsies of the dorsal compartment of the gluteus medius muscle were performed in 7 horses suffering from equine polysaccharide storage myopathy (PSSM) and 6 sound Norman Cob horses . Gene expression analysis was performed using an equine oligonucleotide microarray which includ...

ORGANISM(S): Equus caballus

2009-04-08 | E-GEOD-15572 | biostudies-arrayexpress

An antibody to Streptococcus pneumoniae capsular polysaccharide enhances quorum sensing

The primary mechanism by which pneumococcal capsular polysaccharide-based vaccines are believed to mediate protection is by induction of serotype-specific opsonic antibodies that facilitate bacterial killing by phagocytes (opsonophagocytosis). However, antibodies that are protective against experim...

ORGANISM(S): Streptococcus pneumoniae

2011-03-01 | E-GEOD-27258 | biostudies-arrayexpress

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