Prakash B B - OmicsDI

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Unknown (612)
Transcriptomics (29)
Proteomics (25)
Genomics (2)
Metabolomics (1)

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Homo sapiens (23)
Mus musculus (10)
Arabidopsis thaliana (3)
Bos taurus (3)
Plasmodium falciparum Dd2 (2)
Saccharomyces cerevisiae (2)
Listeria monocytogenes J0161 (1)
Leishmania donovani (1)
Heterodera avenae (1)
Gossypium hirsutum (1)
Sus scrofa (1)
Danio rerio (1)
Amycolatopsis mediterranei S699 (1)
Bacteria (1)
Laodelphax striatellus (1)
Leishmania mexicana MHOM/GT/2001/U1103 (1)
Mycoplasmoides pneumoniae M129 (1)
Nicotiana benthamiana (1)
Nicotiana tabacum (1)
Pseudomonas aeruginosa PAO1H2O (1)

Repository

biostudies-arrayexpress (30)
pride (23)
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Disease

Multiple myeloma (3)
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Graft-versus-host disease (1)

Technology Type

Mass Spectrometry (23)
Shotgun proteomics (10)
Bottom-up proteomics (6)
Affinity purification coupled with mass spectrometry proteomics (5)
Data-independent acquisition (3)
Mass spectrometry (1)
Data-dependent acquisition (1)
Gel-based experiment (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Illumina Genome Analyzer II (1)
Illumina HiSeq 4000 (1)
Q Exactive Plus (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2013 (7)
2012 (6)
2026 (6)
2011 (4)
2021 (4)
2022 (4)
2015 (3)
2010 (3)
2009 (3)
2023 (3)
2018 (3)
2020 (2)
2014 (2)
2016 (1)
2008 (1)
2024 (1)
2025 (1)
2019 (1)

CHEBI ID

CHEBI:131692 (1)
CHEBI:16359 (1)
CHEBI:16755 (1)
CHEBI:17351 (1)
CHEBI:28834 (1)
CHEBI:36006 (1)
CHEBI:36274 (1)
CHEBI:44811 (1)
CHEBI:73060 (1)
CHEBI:73067 (1)
CHEBI:73134 (1)
CHEBI:73851 (1)
CHEBI:74340 (1)
CHEBI:74968 (1)
CHEBI:75168 (1)
CHEBI:75216 (1)
CHEBI:83047 (1)
CHEBI:83055 (1)
CHEBI:86256 (1)
CHEBI:89439 (1)

Metabolite Name

1-Oleoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (1)
1-Palmitoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (1)
1-Stearoyl-2-hydroxy-sn-glycero-3-phosphoethanolamine (1)
2-[(11Z,14Z)-icosadienoyl]-sn-glycero-3-phosphoethanolamine (1)
Chenodeoxycholic Acid (1)
Cholic acid (1)
Deoxycholic acid (1)
Eicosapentaenoic acid (1)
Glycochenodeoxycholic acid (1)
Linoleic acid (1)

Study type

Transcription profiling by array (22)
Comparative genomic hybridization by array (2)
RNA-seq of coding RNA (2)
Cell line - Single-cell sequencing (1)
Unknown experiment type (1)
ChIP-chip by array (1)
ChIP-seq (1)

Release Date

2021 (79)
2022 (63)
2020 (57)
2025 (57)
2024 (57)
2023 (57)
2019 (39)
2018 (32)
2015 (31)
2017 (29)
2014 (27)
2012 (21)
2016 (19)
2010 (17)
2013 (16)
2011 (13)
2009 (11)
2026 (8)
2008 (4)
2006 (2)
2007 (1)
2005 (1)
2000 (1)

Lab affiliation

Dept. of Laboratory Medicine, University of California, San Francisco, CA (3)
All India Institute of Medical Sciences, New Delhi, India (1)
Biophysics Lab, Division of Biochemistry, ICAR-IVRI, Izatnagar, Uttar Pradesh, INDIA. (1)
Centre for Genomic Regulation (CRG), the Barcelona Institute of Science and Technology, Carrer Dr. Aiguader 88, Barcelona 08003, Spain. (1)
Department of Biological Science, National University of Singapore (1)
Department of Biological Sciences, National University of Singapore (1)
Department of Biological Sciences, National University of Singapore, Singapore 119543, Singapore (1)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905, USA Center for Individualized Medicine, Mayo Clinic, Rochester, MN 55905, USA (1)
Department of Microbiology, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India (1)
Department of Pediatrics, UMCG/RUG, Groningen, The Netherlands (1)
Emmy-Noether Research Group Cellular Proteomics and Metabolic Signaling Institute for Diabetes and Obesity Helmholtz Diabetes Center Germany (1)
Head of Proteomics at Glasgow Polyomics, College of Medical Veterinary and Life Sciences, University of Glasgow, UK (1)
Helmholtz diabetes center (1)
Institute for Diabetes and Obesity, Helmholtz Zentrum München, 85764 Neuherberg, Germany German Center for Diabetes Research, Neuherberg, Germany (1)
Noora Kotaja, Associate Professor, Institute of Biomedicine, University of Turku, Finland (1)
Optys Tech Corporation (1)
Professor Rup Lal The Energy and Resources Institute New Delhi-110003, India. (1)
University Hospital Bern (1)
University of Mississippi (1)
University of Oklahoma Health Sciences Center (1)
University of Pittsburgh (1)

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Complete Genome Sequences of Hepatitis B Virus from North India Using Ion Torrent.

Not available

S-EPMC4675933 | biostudies-literature

Extra corporeal membrane oxygenation (ECMO) as bridge to high-risk cardiac surgery.

Not available

S-EPMC8062649 | biostudies-literature

Photophysical deactivation behaviour of Rhodamine B using different graphite materials.

Not available

S-EPMC9066896 | biostudies-literature

Transcriptional analysis of CRISPR I-B arrays of Leptospira interrogans serovar Lai and its processing by Cas6.

Not available

S-EPMC9372919 | biostudies-literature

The core Cas1 protein of CRISPR-Cas I-B in Leptospira shows metal-tunable nuclease activity.

Not available

S-EPMC8610301 | biostudies-literature

Management of juvenile spondyloarthropathy through Ayurveda:- a case report.

Not available

S-EPMC8039353 | biostudies-literature

Dose-Dependent and Subset-Specific Regulation of Midbrain Dopaminergic Neuron Differentiation by LEF1-Mediated WNT1/b-Catenin Signaling.

Not available

S-EPMC7649324 | biostudies-literature

Bolt: A new age peptide search engine for comprehensive MS/MS sequencing through vast protein databases in minutes

The standard platform for proteomics experiments today is mass spectrometry, particularly for samples derived from complex matrices. Recent increases in mass spectrometry sequencing speed, sensitivity and resolution now permit comprehensive coverage of even the most precious and limited samples, par...

ORGANISM(S): Homo sapiens (Human)

2019-08-29 | PXD012700 | Pride

Comparative gene expression profiling of mutants of Amycolatopsis mediterranei S699

The project aims to unveil the mechanism of rifamycin and its analog production by wild type A. mediterranei S699 and mutant A. mediterranei DCO#34 known to produce 24-desmethylrifamycin B at two time points. Stain that donot produce this molecule is taken as the negative control in the study.

ORGANISM(S): Amycolatopsis mediterranei S699

2021-03-11 | PXD016416 | Pride

24-desmethylrifamycin b Amycolatopsis 42h and 96h Production mechanism Rifamycin

Human Cyclophilin B forms part of a multi-protein complex during erythrocyte invasion by Plasmodium falciparum.

Not available

S-EPMC5691159 | biostudies-literature

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