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MetabolomicsGrowth Substrate and Prophage Induction Collectively Influence Metabolite and Lipid Profiles in a Marine Bacterium

Bacterial growth substrates influence a variety of biological functions, including the biosynthesis and regulation of lipid intermediates. The extent of this rewiring is not well understood nor has it been considered in the context of virally-infected cells. Here, we use a one-host-two-temperate ...

2022-08-04 | MTBLS5345 | MetaboLights
ProteomicsProphage excision switches the primary ribosome rescue pathway and rescue-associated gene regulations in Escherichia coli
Total proteome analysis of CP4-57 prophage- and ssrA-related variants in Escherichia coli. Quantification was performed by SWATH-MS method.
ORGANISM(S): Escherichia Coli 
2022-12-07 | PXD033190 | JPOST Repository
ModelsCortes2019 - Optimality of the spontaneous prophage induction rate.
Optimality of the spontaneous prophage induction rate. Cortes MG1, Krog J2, Balázsi G3. 1 Department of Applied Mathematics and Statistics, Stony Brook University, Stony Brook, NY 11794, USA. 2 The Louis and Beatrice Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony...
2024-09-02 | BIOMD0000000884 | BioModels
ProteomicsEffects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 1
Temperate bacteriophages (prophages) have recently been demonstrated in Campylobacter jejuni. However, what they do there is largely unknown. In the series of studies that are the subject of these submissions we have investigated the relative expression levels of proteins in C. jejuni isolates that ...
ORGANISM(S): Campylobacter jejuni 10227 
2014-07-31 | PXD000798 | Pride
Lc-msms  campylobacter jejuni  cjie1 prophage  itraq 
ProteomicsEffects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 3
Temperate bacteriophages (prophages) have recently been demonstrated in Campylobacter jejuni. However, what they do there is largely unknown. In the series of studies that are the subject of these submissions we have investigated the relative expression levels of proteins in C. jejuni isolates that ...
ORGANISM(S): Campylobacter jejuni subsp. jejuni 
2014-07-31 | PXD000800 | Pride
Cjie1 prophage Campylobacter jejuni Itraq Lc-msms 
ProteomicsEffects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 4
Temperate bacteriophages (prophages) have recently been demonstrated in Campylobacter jejuni. However, what they do there is largely unknown. In the series of studies that are the subject of these submissions we have investigated the relative expression levels of proteins in C. jejuni isolates that ...
ORGANISM(S): Campylobacter jejuni subsp. jejuni 
2014-07-31 | PXD000801 | Pride
Campylobacter jejun Itraq Lc-msms   cjie1 prophage 
ProteomicsEffects of Campylobacter jejuni CJIE1 prophage on protein expression experiment 2
Temperate bacteriophages (prophages) have recently been demonstrated in Campylobacter jejuni. However, what they do there is largely unknown. In the series of studies that are the subject of these submissions we have investigated the relative expression levels of proteins in C. jejuni isolates that ...
ORGANISM(S): Campylobacter jejuni 10186 
2014-07-31 | PXD000799 | Pride
Cjie1 prophage Campylobacter jejuni Itraq Lc-msms 
GenomicsProphage Maintenance and mutations
Environmental Dependence on Prophage Maintenance
PRJEB60436 | ENA
Genomicsphi 1720a shiga toxin prophage
phi 1720a shiga toxin prophage
PRJEB102386 | ENA
GenomicsEscherichia coli RS218 genome and prophage
Escherichia coli RS218 genome and prophage
PRJNA49317 | ENA
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