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MetabolomicsEFFECT OF DIFFERENT POOLED QC SAMPLES ON DATA QUALITY DURING AN INTER-BATCH EXPERIMENT IN UNTARGETED UHPLC-HRMS ANALYSIS ON TWO DIFFERENT MS PLATFORMS
Quality control (QC) samples are commonly used in metabolomics approaches for three main reasons: (i) the initial conditioning of the column; (ii) the correction of analytical drift especially between batches; and (iii) the evaluation of measurement precision. In practice there are several ways to p...
2026-02-04 | MTBLS10568 | MetaboLights
GenomicsAPC/CCCS52A2 repressed phytosulfokine signaling restricts root QC cell proliferation through ERF115 degradation
The quiescent center (QC) plays an essential role during root development by creating a microenvironment that preserves the stem cell fate of its surrounding cells. Strikingly, in order to retain root structure, QC cells only occasionally self-renew, displaying a proliferation rate far below that...
ORGANISM(S): Arabidopsis thaliana 
2013-11-04 | E-GEOD-48793 | biostudies-arrayexpress
ProteomicsProteomics of extracellular cement material in the Atlantic salmon louse
Major vault protein (MVP) is the main component of the vault complex, which is a highly conserved ribonucleoprotein complex found in most eukaryotic organisms. MVP or vaults have previously been found to be overexpressed in multidrug-resistant cancer cells and implicated in various cellular processe...
ORGANISM(S): Lepeophtheirus salmonis salmonis 
2024-08-10 | PXD050812 | Pride
Salmon louse Cement Major vault protein 
TranscriptomicsQuality Control in Microarray Assessment of Gene Expression in Human Airway Epithelium
Microarray technology provides a powerful tool for defining gene expression profiles of airway epithelium that lend insight into the pathogenesis of human airway disorders. The focus of this study was to establish rigorous quality control parameters to ensure that microarray assessment of the airway...
ORGANISM(S): Homo sapiens 
2010-09-19 | E-GEOD-11906 | biostudies-arrayexpress
ProteomicsNIST Candidate RM 8461 Human Liver for Proteomics
Advances in mass spectrometry (MS) instrumentation resulting in higher mass resolution and higher duty cycles have allowed deeper coverages of proteomes. The development of candidate RM 8461 Human Liver for Proteomics was undertaken to provide the community with a sample with suitable complexity for...
ORGANISM(S): Homo sapiens (Human) 
2020-11-20 | PXD013608 | Pride
Human Qc material Lc-msms Reference material Nist Liver Orbitrap 
UnknownDissemination and analysis of the quality assurance (QA) and quality control (QC) practices of LC-MS based untargeted metabolomics practitioners.
Not available
S-EPMC7641040 | biostudies-literature
UnknownTotal observed error, total allowable error, and QC rules for canine serum and urine cortisol achievable with the Immulite 2000 Xpi cortisol immunoassay.
Not available
S-EPMC8921817 | biostudies-literature
TranscriptomicsAuxin Induced Endodermal to QC Transdifferentiation Time Series and Downsteam of JKD Analysis
First series collects endodermal cells using the SCR::GFP promoter after treatment with auxin Second series includes comparative samples of jkd vs. wild type plants for specific tissues; QC and meristem In first series, plants are grown under normal conditions, then transferred to auxin analog 2,4-D...
ORGANISM(S): Arabidopsis thaliana 
2015-01-15 | E-GEOD-61408 | biostudies-arrayexpress
TranscriptomicsTranscript profiling of ERF115 transgenic Arabidopsis thaliana
This experiment was set up in order to identify the (direct) transcriptional targets of the Ethylene Response Factor 115 (ERF115) transcription factor. Because ERF115 expression occurs in quiescent center (QC) cells and strong effects on the QC cells were observed in ERF115 overexpression plants, ro...
ORGANISM(S): Arabidopsis thaliana 
2013-11-04 | E-GEOD-48836 | biostudies-arrayexpress
TranscriptomicsSingle-cell RNA-seq for pGL2 and QC cells from the Arabidopsis thaliana root
To demonstrate our method of controlling for technical noise in single-cell RNA-seq experiments we manually collected single A. thaliana cells marked by the expression of green fluorescent protein (GFP) driven by either the GL2 or WOX5 promoters. Seven and six cells were collected from each cell typ...
ORGANISM(S): Arabidopsis thaliana 
2013-03-21 | E-MTAB-1499 | biostudies-arrayexpress
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