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ProteomicsDIA-MS workflows for cyanobacterial proteomics
In this project we introduce new workflows for the in-depth description of the cyanobacterial proteome. The mainstay features of these workflows are the improvement of sample cleanup and digestion through the use of single-pot solid phase-enhanced sample preparation (SP3), the introduction of a rece...
ORGANISM(S): Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2) 
2025-09-15 | PXD062851 | Pride
Dia-ms Cyanobacteria Synechococcus 
ProteomicsAdditional files for Project PXD047856 "Exploring the extracellular landscape of cyanobacteria with deep exoproteomics"
Extracellular proteins are involved in a remarkable number of fundamental processes in cyanobacteria. Yet, there is limited knowledge regarding the identity and function of these proteins. Here, we introduce a solid-phase enhanced protein aggregation workflow that enables description of the cyanobac...
ORGANISM(S): Picosynechococcus sp. PCC 11901 Nostoc punctiforme (strain ATCC 29133 / PCC 73102) Synechocystis sp. PCC 6803 
2026-01-05 | PXD072314 | Pride
Cyanobacteria Exoproteome 
TranscriptomicsAscl1, Nurr1 and Lmx1 convert mouse and human fibroblasts into functional dopaminergic neurons without passing through an intermediate precursor state
Lineage-specific transcription factors, which drive cellular identity during embryogenesis, have been shown to convert cell fate when express ectopically in heterologous cells. Herein, we screened the key molecular factors governing the dopaminergic neuronal specification during brain development fo...
ORGANISM(S): Mus musculus 
2011-07-04 | E-GEOD-27174 | biostudies-arrayexpress
ProteomicsA metaproteomic analysis of the response of a freshwater microbial community under nutrient enrichment
Eutrophication can lead to an uncontrollable increase in algal biomass, which has repercussions for the entire microbial and pelagic community. Studies have shown how nutrient enrichment affects microbial species succession, however details regarding the impact on community functionality are rare. H...
ORGANISM(S): mixed sample 
2016-08-01 | PXD004592 | Pride
Eutrophic Lc-msms Freshwater Oligotrophic Microbial loop Metaproteomics 
ProteomicsMaTAR25 RNA Antisense Pulldown and Mass Spectrometry
It has been suggested that lncRNAs can interact with transcriptional regulators/co-factors to form ribonucleoprotein (RNP) complexes to regulate the expression of downstream genes in the cell nucleus. To identify potential interacting proteins of MaTAR25, we used two different paired sets of biotin-...
ORGANISM(S): Mus musculus (Mouse) 
2020-12-23 | PXD017398 | Pride
Breast cancer Mouse Protein interaction Lncrna Biotin-oligos Matar25 
UnknownPreexposure chemoprophylaxis for HIV prevention in men who have sex with men.
Not available
S-EPMC3079639 | biostudies-literature
UnknownGlobal anaesthesia practice using inguinal hernia surgery as a tracer condition: a secondary analysis of an international prospective cohort study.
Not available
S-EPMC12519944 | biostudies-literature
UnknownA prognostic model for use before elective surgery to estimate the risk of postoperative pulmonary complications (GSU-Pulmonary Score): a development and validation study in three international cohorts.
Not available
S-EPMC12056793 | biostudies-literature
UnknownHLA-DRB1*11 and variants of the MHC class II locus are strong risk factors for systemic juvenile idiopathic arthritis.
Not available
S-EPMC4702958 | biostudies-literature
UnknownAzithromycin in patients admitted to hospital with COVID-19 (RECOVERY): a randomised, controlled, open-label, platform trial.
Not available
S-EPMC7884931 | biostudies-literature
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