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Proteomicscomprehensive SAAVs detection in PANC-1 cell line
Three different strategies were applied for SAAVs detection. We predicted deleterious SAAVs using online AssVar and confirm 3 SAAVs using SRM
ORGANISM(S): Homo sapiens (Human) 
2021-09-09 | PXD017449 | Pride
Saavs Panc-1 Srm Lc-ms/ms 
UnknownSingle Amino Acid Variant Discovery in Small Numbers of Cells.
Not available
S-EPMC6465122 | biostudies-literature
UnknownComprehensive Detection of Single Amino Acid Variants and Evaluation of Their Deleterious Potential in a PANC-1 Cell Line.
Not available
S-EPMC7162681 | biostudies-literature
ProteomicsnextPP for chromosome-based proteomic research using neXtProt and GENCODE databases
In this study, we introduce a streamlined pipeline using customized and concatenated GENCODE and neXtProt databases with controlled false discovery rate (FDR) for finding GENCODE ASVs and missing proteins while mapping onto single amino acid variants (SAAVs) from Hippocampal dataset.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2017-07-25 | MSV000081385 | MassIVE
UnknownSingle Amino Acid Variant Profiles of Subpopulations in the MCF-7 Breast Cancer Cell Line.
Not available
S-EPMC5718353 | biostudies-literature
UnknownSingle-amino acid variants reveal evolutionary processes that shape the biogeography of a global SAR11 subclade.
Not available
S-EPMC6721796 | biostudies-literature
UnknownState of the Human Proteome in 2014/2015 As Viewed through PeptideAtlas: Enhancing Accuracy and Coverage through the AtlasProphet.
Not available
S-EPMC4755269 | biostudies-literature
ProteomicsPart II: Proteomics Target Approach for Taxonomic and Sex Identification in Modern and Archaeological Enamel Caprines
In this study, we applied proteomic analytical methods to modern caprine (sheep, Ovis aries and goat, Capra hircus) tooth enamel to establish a reliable method for identifying species-specific and sex-specific peptides. Utilizing single amino acid variations (SAAVs) in Enamelin (Enam) and Amelogenin...
ORGANISM(S): Capra hircus (Goat) 
2025-09-15 | PXD058279 | Pride
Species Enam Caprines amels 
ProteomicsPart I: Proteomics Target Approach for Taxonomic and Sex Identification in Modern and Archaeological Enamel Caprines
. In this study, we applied proteomic analytical methods to modern caprine (sheep, Ovis aries and goat, Capra hircus) tooth enamel to establish a reliable method for identifying species-specific and sex-specific peptides. Utilizing single amino acid variations (SAAVs) in Enamelin (Enam) and Amelogen...
ORGANISM(S): Capra hircus (Goat) 
2025-09-15 | PXD058275 | Pride
Species Amel Caprines Sex Enam 
UnknownProteogenomic analysis prioritises functional single nucleotide variants in cancer samples.
Not available
S-EPMC5707065 | biostudies-literature
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