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TranscriptomicsGene expression analysis of human keratinocytes (HaCaTs) after non-thermal plasma treatment
Investigation of gene expression in human skin keratinocytes (HaCaT) following non-thermal plasma treatment for 20 s, 60 s, and 180 s compared to untreated and H2O2-treated controls. Microarrays were used to analyze and investigate the biological effects of non-thermal plasma on human keratinocyte c...
ORGANISM(S): Homo sapiens 
2014-06-12 | E-GEOD-58395 | biostudies-arrayexpress
TranscriptomicsHuman melanoma transcriptom is modulated by cold plasma treatment
Treatment of tumor progression and metastasis continues to be of major importance in the field of cancer. It is reported that cancer cells often show a pronounced sensitivity towards oxidative stress. Cold plasma offers the ability to deliver a delicate mix of reactive oxygen and nitrogen species di...
ORGANISM(S): Homo sapiens 
2015-02-18 | E-GEOD-65972 | biostudies-arrayexpress
GenomicsEpstein-Barr Virus oncoprotein super-enhancers control B cell growth
Super-enhancers are principal determinants of cell transcription, development, phenotype, and oncogenesis, not yet implicated in host-pathogen interactions. We found four Epstein-Barr virus (EBV) oncoproteins and five EBV-activated NF-M-oM-^AM-+B subunits co-occupying thousand of enhancer sites in E...
ORGANISM(S): Homo sapiens 
2014-11-01 | E-GEOD-62912 | biostudies-arrayexpress
GenomicsGenome-Wide Profiling of Peroxisome Proliferator-Activated Receptor M-NM-3 in Primary Epididymal, Inguinal, and Brown Adipocytes Reveals Depot-Selective Binding Correlated with Gene Expression
Here we have employed chromatin immunoprecipitation combined with deep sequencing to map and compare PPARM-NM-3 binding in in vitro differentiated primary mouse adipocytes isolated from epididymal, inguinal, and brown adipose tissues. While these PPARM-NM-3 binding profiles are overall similar, the...
ORGANISM(S): Mus musculus 
2012-10-11 | E-GEOD-41481 | biostudies-arrayexpress
ProteomicsCapacitive electrical stimulation effects on osteoblast-released matrix microvesicles
Passive implants currently used in the clinics cannot prevent failure rates and inherent revision arthroplasties. Novel bioelectronic devices that include biophysical stimulators (such as electric stimulators) and sensing systems are desired since these will allow for long-term monitoring and contro...
ORGANISM(S): Mus musculus (Mouse) 
2021-11-29 | PXD028551 | Pride
Extracellular Capacitive coupling Electrical stimulation Bone Osteoblasts Matrix microvesicles Lc-ms/ms 
GenomicsDNA double-strand breaks induced by high NaCl occur predominantly in gene deserts
High concentration of NaCl increases DNA breaks both in cell culture and in vivo. The breaks remain elevated as long as NaCl concentration remains high and are rapidly repaired when the concentration is lowered. Repair of the breaks after NaCl is reduced is accompanied by formation of foci containi...
ORGANISM(S): Mus musculus 
2011-11-21 | E-GEOD-32882 | biostudies-arrayexpress
TranscriptomicsExpression data from Pseudomonas putida KT2440 (RNA-Seq data)
We used cDNA generated from total mRNA for RNA-Seq analysis (Genome Analyzer II at GATC Biotech AG) to monitore the gene expression of P. putida after a cold shock from 30M-BM-0C to 10M-BM-0C Culture was grown in minimal medium supplemented with succinate at 30M-BM-0C. In mid-exp. phase cells were ...
ORGANISM(S): Pseudomonas putida KT2440 
2011-02-01 | E-GEOD-24175 | biostudies-arrayexpress
UnknownCombined adult neurogenesis and BDNF mimic exercise effects on cognition in an Alzheimer's mouse model.
Not available
S-EPMC6149542 | biostudies-literature
TranscriptomicsGene expression analysis of HaCaTs after non-thermal plasma treatment
Investigation of gene expression in cultured human skin epithelial keratinocytes (HaCaT) following non-thermal plasma treatment for 60 s, compared to untreated control. Non-thermal atmospheric pressure plasma has recently gained attention in the field of biomedical and clinical applications. In the ...
ORGANISM(S): Homo sapiens 
2013-04-26 | E-GEOD-46343 | biostudies-arrayexpress
ProteomicsLC-MS/MS of differentiated bone marrow and Yolk sac macrophages
We immortalized hematopoietic progenitors from Yolk sac (YS) and bone marrow (BM) using conditional homeobox protein Hox-B8 (Hoxb8) and carried out global protein profiling using a bottom-up approach.
ORGANISM(S): Mus musculus (Mouse) 
2025-08-07 | PXD026916 | Pride
Lc-ms/ms Hoxb8 Bone marrow Yolk sac Macrophages 
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