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TranscriptomicsCell-cycle regulation of cohesin stability along fission yeast chromosomes
Sister chromatid cohesion is mediated by cohesin but the process of cohesion establishment during S phase is still enigmatic. Recent data indicate that in mammalian cells, cohesin binding to chromatin is dynamic in G1 but becomes stabilized during S phase. Whether the regulation of chromosomal cohes...
ORGANISM(S): Schizosaccharomyces pombe 
2007-11-30 | E-GEOD-8450 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of human NK cells sorted into CD56dim and CD56bright NK cell subpopulations
Human NK cells were sorted into CD56dim and CD56bright NK cell subpopulations. In order to define characteristics of both populations gene profiling was performed using Affymetrix arrays U133a and U133B.
ORGANISM(S): Homo sapiens 
2006-05-31 | E-MEXP-380 | biostudies-arrayexpress
GenomicsA carrier-assisted ChIP-seq method for Estrogen Receptor-chromatin interactions from breast cancer core needle biopsy samples
The Estrogen Receptor alpha (ERa) is the key transcriptional regulator in luminal breast cancer and the main target for adjuvant treatment. Luminal gene signatures are dictated by the transcriptional capacities of ERa, which are a direct consequence of the receptors binding preference at specific si...
ORGANISM(S): Homo sapiens 
2013-04-01 | E-MTAB-1534 | biostudies-arrayexpress
TranscriptomicsMicroRNA signatures predict Estrogen receptor, Progesterone receptor and HER2/neu receptor status in Breast Cancer
Breast cancer is a heterogeneous disease encompassing a number of phenotypically diverse tumours. Expression levels of the estrogen, progesterone and HER2/neu receptors which characterise clinically distinct breast tumors have been shown to change during disease progression and in response to system...
ORGANISM(S): Homo sapiens 
2010-05-18 | E-GEOD-15885 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of eight different time periods of the Anopheles gambiae lifecycle
We conducted a genome wide survey of mosquito gene expression profiles during 8 different time periods of the Anopheles gambiae lifecycle. The timeperiods included embryos, E, collected 12-14 hours post oviposition (hpo), five larval samples, La-Le, with La collected approximately 48h hpo and the re...
ORGANISM(S): Anopheles gambiae 
2007-07-19 | E-TABM-186 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of head, midgut, carcass and ovaries of adult Anopheles gambiae mosquitoes
We conducted a genome wide survey of mosquito gene expression profiles in 4 different tissues of adult Anopheles gambiae mosquitoes. The tissues included the head, the midgut, the carcass (corresponding to the remainder of the mosquito after decapitation and midgut removal) and ovaries. Ovaries were...
ORGANISM(S): Anopheles gambiae 
2007-07-19 | E-TABM-153 | biostudies-arrayexpress
ProteomicsHS_Plk1_Specific_Phos_SILAC
HS_Plk1_Specific_Phosphosites_SILAC
ORGANISM(S): Homo Sapiens (human) 
2011-12-31 | PAe005279 | PeptideAtlas
ProteomicsProteome of neutrophils upon migration towards inflamed synovial fluid
Analysis of neutrophil proteomic alterations induced by migration towards inflamed joints in juvenile idiopathic arthritis (JIA). In this experiment neutrophil proteomes were investigated after migration towards JIA synovial fluid in an in vitro model of a synovial membrane, compared to neutrophils ...
ORGANISM(S): Homo sapiens (Human) 
2022-02-15 | PXD029129 | Pride
Juvenile idiopathic arthritis Migration Synovial fluid Neutrophil 
Genomics2013-11-19-17-24-36-breez-MB-2013-10-18-Whole_exome_DNAseq_Medulloblastoma - samples
Illumina HiSeq sequence data (with >80x coverage) were aligned to the hg19 human reference genome assembly using BWA (Li and Durbin, 2009); duplicate reads were removed from the final BAM file. No realignment or recalibration was performed. The whole exome sequencing data of 20 SHH medulloblastomas ...
EGAD00001000698 | EGA
GenomicsSHH medulloblastoma samples
Sequencing data of human SHH medulloblastoma samples
EGAS00001000607 | EGA
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