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ProteomicsBacillus licheniformis meets ulvan: a marine polysaccharide as potential industrial feedstock
Proteomes of Bacillus licheniformis DSM13 cultivated with glucose, rhamnose as well as ulvan or two ulvan hydrolysates (UHA and UHB). Hydrolysates were generated using selected Formosa agariphila KM3901 ulvan-PUL encoded enzymes.
ORGANISM(S): Bacillus licheniformis DSM 13 = ATCC 14580 
2022-11-02 | PXD033411 | Pride
Lc-ms/ms Bacillus licheniformis Ulvan 
ProteomicsThe marine Bacteroidetes Muricauda sp. MAR_2010_75 digests diatom β-mannan
The polysaccharide β-mannan, which is common in terrestrial plants but unknown in microalgae, was recently detected during diatom blooms. We identified a β-mannan polysaccharide utilization locus (PUL) in the genome of the marine Flavobacterium Muricauda sp. MAR_2010_75 which resembles PULs in bacte...
ORGANISM(S): Muricauda sp. MAR_2010_75 
2022-11-24 | PXD033586 | Pride
Marine bacteroidetes Polysaccharide degradation Muricauda Β-mannan Subproteome 
ProteomicsUtilization of alpha- and beta-mannan by marine Flavobacteriia
About one half of the global, biogenic carbon dioxide fixation into organic matter is driven by microscopic algae in the surface oceans. These microalgal activities generate, among other molecules, polysaccharides that are food for and recycled by bacteria with polysaccharide utilization loci (PULs)...
ORGANISM(S): Leeuwenhoekiella sp. MAR_2009_132 
2018-10-17 | PXD009066 | Pride
Leeuwenhoekiella Marine Mannan Polysaccharide 
ProteomicsUtilization of alpha- and beta-mannan by marine Flavobacteriia
About one half of the global, biogenic carbon dioxide fixation into organic matter is driven by microscopic algae in the surface oceans. These microalgal activities generate, among other molecules, polysaccharides that are food for and recycled by bacteria with polysaccharide utilization loci (PULs)...
ORGANISM(S): Salegentibacter sp. Hel_I_6 
2018-10-17 | PXD009080 | Pride
Leeuwenhoekiella Marine Proteomics Polysaccharide Degradation Salegentibacter 
ProteomicsSuccession of proteomic, transcriptomic and exometabolomic signatures in Alteromonas macleodii degrading a mix of macroalgal polysaccharides
Polysaccharides from macroalgae are important bacterial nutrient source and central biogeochemical component in the oceans. To illuminate the cellular mechanisms of polysaccharide degradation by marine bacteria, growth of Alteromonas macleodii 83-1 on a mix of laminarin, alginate and pectin was char...
ORGANISM(S): Alteromonas macleodii 
2018-08-22 | PXD008280 | Pride
Catabolite repression Polysaccharide degradation Alteromonas 
ProteomicsHyper-specialized Bacteroidetes selfishly compete for laminarin in microalgal blooms
Laminarin is a major storage polysaccharide in phytoplankton and an important carbon and energy source for marine microbes. How microbes compete for this labile polysaccharide in nature remains unclear. Here we investigated metaproteomes and metagenomes of bacterioplankton during four consecutive al...
ORGANISM(S): Formosa sp. Hel1_33_131 
2018-07-31 | PXD007934 | Pride
Marine Formosa Laminarin degradation Bacteroidetes 
ProteomicsHost-symbiont proteomes of Bathymodiolus thermophilus
Bathymodiolus mussels inhabiting deep-sea hydrothermal vents harbor bacterial symbionts in their gills, which support the animals’ diet. While the basic mechanisms of energy generation and CO2 fixation that drive these symbioses are largely established, details of molecular interactions between the ...
ORGANISM(S): Bathymodiolus azoricus (Mussel) Bathymodiolus thermophilus 
2019-11-08 | PXD011639 | Pride
Bathymodiolus Symbiosis Hydrothermal vent Symbiont Host Proteome 
ProteomicsBathymodiolus azoricus host-symbiont proteomics
Bathymodiolus azoricus is a deep-sea mussel found in the hydrothermal vent fields of the Mid-Atlantic Ridge. It lives in symbiosis with sulfur- and methane-oxidizing γ-proteobacteria within its gills. In our study, we aimed to understand the metabolic and physiological interconnections between the s...
ORGANISM(S): thiotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen) Bathymodiolus azoricus (Mussel) methanotrophic endosymbiont of Bathymodiolus azoricus (Menez Gwen) 
2016-10-06 | PXD004061 | Pride
Bathymodiolus Proteomics Symbiont Host Lc-ms/ms 
UnknownUnique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria.
Not available
S-EPMC10033563 | biostudies-literature
UnknownConnecting Algal Polysaccharide Degradation to Formaldehyde Detoxification.
Not available
S-EPMC9400963 | biostudies-literature
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