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MetabolomicsEnvironmental impacts on barley grain composition and longevity

To counter projected reductions in yields of the major crop barley, it is essential to elucidate the mechanisms of its resilience. To assist such efforts, we collected grains from plants grown in fields at 12 testing stations, with suitable temperature and precipitation gradients for identifying ...

2023-03-07 | MTBLS5778 | MetaboLights
ProteomicsLarge-scale discovery proteomics - Nitrospira moscoviensis
A large-scale discovery proteomics experiment was performed on biomass of Nitrospira moscoviensis (Lab head, Dr. Sebastian Lücker, RU, NL). The soluble protein fraction was analysed following high pH reverse-phase peptide fractionation. The insoluble membrane fraction was solubilised by an optimised...
ORGANISM(S): Nitrospira moscoviensis 
2021-07-22 | PXD019583 | Pride
Qe plus Nitrospira moscoviensis Shot-gun proteomics 
ProteomicsEnvironment and its impact on barley grain composition
Grain samples of Hordeum vulgare L. sensu lato variety Sebastian were obtained from plants grown in the fields at four breeding stations in 2017, representing seed development under different combinations of temperature and rainfall.Sample description:CAS [1-4] - location n. 5 - (Caslav) - high yiel...
ORGANISM(S): Hordeum vulgare (Barley) 
2023-02-07 | PXD020324 | Pride
Temperature Longevity Seed Barley Drought 
MetabolomicsA general non-self response as part of plant immunity
Plants, like other multicellular lifeforms, are colonized by microorganisms. How plants respond to their microbiota is currently not well understood. We used a phylogenetically diverse set of 39 endogenous bacterial strains from Arabidopsis thaliana leaves to assess host transcriptional and metaboli...
2021-09-13 | MTBLS2522 | MetaboLights
ProteomicsProteomic analysis of sap reveals root-shoot communication dynamics in potato and barley following flg22 treatment
Potato (Solanum tuberosum, variety Princ) and barley (Hordeum vulgare, variety Sebastian) plants were cultivated in a controlled environment. Plants were grown in Potgrond H soil (Klasmann-Deilmann GmbH, Germany) under a 12-hour photoperiod with a constant temperature of 21 °C and a photon flux dens...
ORGANISM(S): Solanum tuberosum (Potato) Hordeum vulgare (Barley) 
2024-07-20 | PXD053406 | Pride
Extracellular proteins Exudates Xylem sap Flg22 
UnknownStromal oncostatin M cytokine promotes breast cancer progression by reprogramming the tumor microenvironment.
Not available
S-EPMC8970678 | biostudies-literature
TranscriptomicsRNA-seq from gastrocnemius muscles from rats aged 6, 12, 18, 21, 24 and 27 months
To gain new insights into molecular changes in skeletal muscle aging and disease with a special focus on differential alternative splicing and senescence, we performed RNA-seq on rat gastrocnemius muscles of animals aged 6, 12, 18, 21, 24 and 27 months, using a rat sarcopenia model we had previously...
ORGANISM(S): Rattus norvegicus 
2021-06-26 | E-MTAB-10583 | biostudies-arrayexpress
UnknownTranscriptional inaccuracy threshold attenuates differences in RNA-dependent DNA synthesis fidelity between retroviral reverse transcriptases.
Not available
S-EPMC5766491 | biostudies-literature
TranscriptomicsTranscription profiling of yeast Gcn4 and Arr1 deletion mutant as well as Gcn4 Arr1 double deletion mutant.
Transcription profiling of wild type yeast strain as well as strains carrying a deletion of Gcn4, Arr1 or both. Gene expression in rich medium (YPD) and under osmotic stress conditions (YPD + 0.8M NaCl) was compared.
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-25 | E-MEXP-3566 | biostudies-arrayexpress
MetabolomicsHost-parasite co-metabolic activation of antitrypanosomal aminomethyl-benzoxaboroles
Recent development of benzoxaborole-based chemistry gave rise to a collection of compounds with great potential in targeting diverse infectious diseases, including human African Trypanosomiasis (HAT), a devastating neglected tropical disease. However, further medicinal development is largely restric...
2018-02-12 | MTBLS452 | MetaboLights
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