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TranscriptomicsIdentification and validation of antisense RNAs in Escherichia coli
In this study transcriptional start sites (TSS) of E. coli were determined for several growth conditions To detect the complement of transcripts expressed from E. coli, we collected two independent biological replicates (B1 and B2 samples) from MG1655 wild type strain grown to exponential (OD 600 ~0...
ORGANISM(S): Escherichia coli str. K-12 substr. MG1655 
2014-10-18 | E-GEOD-55199 | biostudies-arrayexpress
TranscriptomicsTranscriptome profiling of E. coli under different naphthoquinone treatments
E. coli MG1655 was grown in the presence of either PL (Plumbagin)/JU (Juglone)/ME (Menadione) (50 micro molar) and DMSO (0.75%)as control, and subjected to microarray analysis. The aim of the work was to understand the structure-function relationship between plumbagin and its analogues.
ORGANISM(S): Escherichia coli 
2013-08-14 | E-MEXP-3765 | biostudies-arrayexpress
TranscriptomicsAnalysis of chronic lymphocytic leukemia CLL cells and normal B cells
We have analyzed 2 normal B cells isolated from peripheral blood and 5 CLL specimens with affy 133A microarray for expression. We used microarrays to analyze gene expression in normal B cells and CLL cells. Hybridize RNA to the chip for the above mentioned total 5 samples
ORGANISM(S): Homo sapiens 
2009-09-10 | E-GEOD-18026 | biostudies-arrayexpress
ProteomicsExpression of Siglec-E alters the proteome of LPS-activated macrophages but does not affect LPS-driven cytokine production or TLR4 endocytosis Expression of Siglec-E alters the proteome of LPS-activated macrophages but does not affect LPS-driven cytokine production or TLR4 endocytosis
Siglec-E is a murine CD33-related siglec that functions as an inhibitory receptor and is expressed mainly on neutrophils and macrophage populations. Recent studies have suggested that siglec-E is an important negative regulator of LPS-TLR4 signalling and one report (Wu et al 2016) claimed that sigl...
ORGANISM(S): Mus musculus (Mouse) 
2018-02-09 | PXD008406 | Pride
Mouse bmdm lc-msms 
UnknownAntibody and Memory B Cell Responses in Hepatitis E Recovered Individuals, 1-30 Years Post Hepatitis E Virus Infection.
Not available
S-EPMC6411774 | biostudies-literature
UnknownPolypyrimidine tract binding protein blocks the 5' splice site-dependent assembly of U2AF and the prespliceosomal E complex.
Not available
S-EPMC1635971 | biostudies-literature
ProteomicsDynamic 23S rRNA modification ho5C2501 benefits Escherichia coli under oxidative stress
Post-transcriptional modifications are added to ribosomal RNAs (rRNAs) to govern ribosome biogenesis and to fine-tune protein biosynthesis. RlhA, a dedicated modification enzyme, adds a unique 5-hydroxycytidine (ho5C) at 23S rRNA position 2501 in E. coli and related bacteria. However, the molecular ...
ORGANISM(S): Escherichia coli 
2022-02-16 | PXD025875 | Pride
E. coli Ribosome Dps Oxidative stress Rlha Rna modifications 
UnknownCloning, gene regulation, and neuronal proliferation functions of novel N-terminal-truncated carboxypeptidase E/neurotrophic factor-αl variants in embryonic mouse brain.
Not available
S-EPMC6355066 | biostudies-literature
UnknownDevelopment of immunodetection system for botulinum neurotoxin serotype E.
Not available
S-EPMC6118135 | biostudies-literature
UnknownRegulatory Role of B Cells and Its Subsets in Hepatitis E Virus Infection.
Not available
S-EPMC9484887 | biostudies-literature
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