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ProteomicsHiRIEF-LC-MS based proteomics on Small Intestinal Neuroendocrine Tumors (SI-NET) and SI-NET cell lines
Part I - SI-NET tumors High Resolution Isoelectric Focusing (HiRIEF) LC-MS and relative quantification by iTRAQ 8-plex was used to analyze 14 small intestinal neuroendocrine tumors (SI-NETs). The data was obtained from two separate TMT10plex sets and linked by a single internal pooled standard. The ...
ORGANISM(S): Homo sapiens (Human) 
2020-12-09 | PXD009877 | Pride
Human Cancer Si-net Clinical Pevonedistat Mln4924 Timecourse 
ProteomicsHiRIEF-LC-MS based proteomics on Small Intestinal Neuroendocrine Tumors (SI-NET) and SI-NET cell lines
Associated to PXD009877 which contains Part I and Part II. Part III – Pevonedistat/MLN4924 and Bortezomib treatment of the SI-NET (small intestinal – neuroendocrine tumor) cell line CNDT2. High Resolution Isoelectric Focusing (HiRIEF) LC-MS and relative quantification by TMT 10-plex was used to an...
ORGANISM(S): Homo sapiens (Human) 
2021-06-10 | PXD013024 | Pride
Human Pevonedistat Neuro endocrine tumor Bortezomib Cell line 
GenomicsRelation of small intestine neuroendocrine tumor (SI-NET) properties and epigenetics to normal human enteroendocrine cell differentiation [scATAC-seq]
Relation of small intestine neuroendocrine tumor (SI-NET) properties and epigenetics to normal human enteroendocrine cell differentiation [scATAC-seq]
PRJNA998716 | ENA
GenomicsRelation of small intestine neuroendocrine tumor (SI-NET) properties and epigenetics to normal human enteroendocrine cell differentiation [scATAC-seq]
To investigate the relation of small intestine neuroendocrine tumor (SI-NET) properties and epigenetics to normal human enteroendocrine cell differentiation [scATAC-seq] We established Neurog3ER inducible cell lines and then performed chromatin analysis at single cell level using data obtained from ...
ORGANISM(S): Homo sapiens 
2026-04-29 | GSE238273 | GEO
Genomics314542a1-6049-4767-958c-f847ef64c2dc - samples
This dataset comprises of 76 cancer and normal whole genomes obtained from 11 SI-NET patients, in the form of two fastq files (forward and reverse reads) for each genome containing sequences generated by Illumina NovaSeq 6000 system.
EGAD00001006161 | EGA
GenomicsWhole genome sequencing of 76 tumor and normal samples from 11 SI-NET patients
We have sampled 11 patients with multifocal SI-NETs. The complete genome sequences of 65 tumor and tissue samples including 42 intestinal lesions, 14 adjacent lymph node metastases, 5 distant metastases, as well as of 4 normal tissue and 11 normal blood samples were determined. This allowed elucidat...
EGAS00001005096 | EGA
UnknownA progeroid syndrome caused by a deep intronic variant in TAPT1 is revealed by RNA/SI-NET sequencing.
Not available
S-EPMC9906387 | biostudies-literature
TranscriptomicsExpression profile of Gastro-Entero-Pancreatic Neuroendocrine Tumors (GEP-NET)
Expression profile of human GEP-NET tumors, including 113 fresh frozen biopsies of primary and metastatic tumours originating from pancreas (P-NET, 83 primary and 30 metastasis), 81 from small intestine (SI-NET, 44 primary and 37 metastasis), and 18 from rectum (RE-NET, 3 primary and 15 metastasis).
ORGANISM(S): Homo sapiens 
2018-02-25 | GSE98894 | GEO
UnknownA progeroid syndrome caused by a deep intronic variant in TAPT1 is revealed by RNA/SI-NET sequencing
Not available
S-SCDT-10_15252-EMMM_202216478 | biostudies-other
TranscriptomicsMicroRNA expression profiling of small-intestine neuroendocrine tumors and human neuroendocrine tumor cell lines
Small intestinal neuroendocrine tumors (SI-NETs) arise from serotonin-producing enterochromaffin cells. SI-NETs are often well-differentiated tumors and most patients have regional or distant metastases at initial presentation. MicroRNAs (miRs) are post-transcriptional regulators which are important...
ORGANISM(S): Homo sapiens 
2013-03-01 | E-GEOD-33568 | biostudies-arrayexpress
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