Spectrum counting

Show results for

Proteomics (276)
Unknown (134)
Metabolomics (19)
Transcriptomics (18)
Genomics (6)
Other (3)

Organisms

Andropogon gerardi (108)
Bacteria (108)
Canis lupus familiaris (108)
Chromatiales bacterium OalgGamma1 (108)
Clavibacter nebraskensis NCPPB 2581 (108)
Cnidaria (108)
Ensifer adhaerens (108)
Fasciola (108)
Human alphaherpesvirus 1 strain 17 (108)
Human alphaherpesvirus 1 strain KOS (108)
Human betaherpesvirus 5 (108)
Human herpesvirus 2 strain 186 (108)
Mesocricetus auratus (108)
Miscanthus x giganteus (108)
Mus musculus (108)
Panicum virgatum (108)
Platyhelminthes (108)
Pseudomonas aeruginosa PA103 (108)
Fusarium sinicum (17)
Homo sapiens (8)
Mus musculus (6)
Rattus norvegicus (2)
Arabidopsis thaliana (2)
Pectobacterium carotovorum (1)
Rana temporaria (1)
Streptococcus pyogenes (1)
Caenorhabditis elegans (1)
Danio rerio (1)
Rattus (1)
cellular organisms (1)

Organisms

Homo sapiens (1)

Repository

PAXDB (161)
pride (108)
biostudies-arrayexpress (22)
MetaboLights (19)
MassIVE (4)
GPMDB (3)
jPOST (2)
geo (1)
iProX (1)
ENA (1)

Tissue

Cell culture (11)
Epithelial cell (7)
Blood (5)
Liver (5)
Root (5)
Hepatocyte (4)
Blood plasma (3)
Leaf (3)
Lung (3)
Plant cell (3)
Whole body (3)
B cell (2)
Blood cell (2)
Blood platelet (2)
Blood serum (2)
Bone marrow (2)
Brain (2)
Cell suspension culture (2)
Cerebrospinal fluid (2)
Fibroblast (2)
Milk (2)
Photosynthetic cell (2)
Platelet (2)
T cell (2)
Breast (1)
Breast cancer cell line (1)
Cerebral cortex (1)
Cervical epithelial cell (1)
Cervical mucus (1)
HeLa cell (1)

Disease

Disease free (4)
Not Available (3)
Breast cancer (3)
Acute leukemia (2)
Mastitis (2)
Plasmodium falciparum malaria (2)
Acute myeloid leukemia (1)
Allergic asthma (1)
Bacterial sepsis (1)
Breast cancinoma (1)
Cervical squamous cell carcinoma (1)
Colon adenocarcinoma (1)
Dental caries (1)
Glaucoma (1)
Head and neck squamous cell carcinoma (1)
Idiopathic pulmonary fibrosis (1)
Infertility (1)
Leptospirosis (1)
Liver cancer (1)
Myofibrillar myopathy (1)
Obesity (1)
Open-angle glaucoma (1)
Pulmonary fibrosis (1)
Relapsing-remitting multiple sclerosis (1)
Septic shock (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (108)
Shotgun proteomics (78)
Mass spectrometry (15)
Bottom-up proteomics (15)
Data-dependent acquisition (9)
Gel-based experiment (8)
Affinity purification coupled with mass spectrometry proteomics (6)
Top-down proteomics (4)
NMR spectroscopy (2)
Mass spectrometry assay (2)
Data-independent acquisition (2)
Glycoproteomics (2)
SWATH MS (2)
All-ion fragmentation (1)
Mass spectrometry imaging (1)

Instrument Platform

Illumina NovaSeq 6000 (3)
Instrument (3)
Gas Chromatography MS - positive (3)
Liquid Chromatography MS - positive - reverse phase (3)
Liquid Chromatography MS - negative - reverse phase (3)
Orbitrap Fusion Lumos (2)
Q Exactive HF (2)
6550 iFunnel Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - (2)
Bruker (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Illumina HiSeq 3000 (1)
NextSeq 500 (1)
Orbitrap Eclipse (1)
Orbitrap Fusion (1)
Q Exactive (1)
ABI 4800 Plus MALDI-TOF/TOF (1)
ABI 4800 Plus MALDI-TOF/TOF MS/MS (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2020 (87)
2022 (25)
2014 (22)
2019 (20)
2021 (19)
2016 (19)
2023 (18)
2015 (18)
2018 (16)
2025 (15)
2013 (14)
2017 (14)
2024 (8)
2011 (7)
2026 (6)
2009 (3)
2010 (2)
2012 (1)
2006 (1)
2008 (1)

UNIPROT ID/AC

TPIS_HUMAN (17)
ARPC4_HUMAN (16)
CATA_HUMAN (16)
G3P_HUMAN (16)
GELS_HUMAN (16)
GGH_HUMAN (16)
HSPB1_HUMAN (16)
LDHB_HUMAN (16)
MINP1_HUMAN (16)
3HIDH_MOUSE (15)
4F2_HUMAN (15)
6PGD_HUMAN (15)
6PGL_HUMAN (15)
AATC_MOUSE (15)
ACAD9_MOUSE (15)
ACON_MOUSE (15)
ACTB_HUMAN (15)
ACTN1_MOUSE (15)
ACTZ_MOUSE (15)
AIMP1_MOUSE (15)
AK1A1_MOUSE (15)
AL7A1_MOUSE (15)
ALDOA_HUMAN (15)
AMPB_MOUSE (15)
AMPL_MOUSE (15)
ANXA6_MOUSE (15)
AP1B1_MOUSE (15)
ARP2_MOUSE (15)
ARP3_MOUSE (15)
ARPC3_HUMAN (15)

CHEBI ID

CHEBI:18237 (5)
CHEBI:16870 (5)
CHEBI:15891 (4)
CHEBI:17659 (4)
CHEBI:16027 (4)
CHEBI:18050 (4)
CHEBI:16264 (4)
CHEBI:16919 (4)
CHEBI:30769 (4)
CHEBI:16857 (3)
CHEBI:15713 (3)
CHEBI:18066 (3)
CHEBI:27266 (3)
CHEBI:28044 (3)
CHEBI:16856 (3)
CHEBI:6650 (3)
CHEBI:18132 (3)
CHEBI:18012 (3)
CHEBI:16761 (3)
CHEBI:30915 (3)
CHEBI:15741 (3)
CHEBI:15354 (3)
CHEBI:15603 (3)
CHEBI:17295 (3)
CHEBI:16828 (3)
CHEBI:136124 (2)
CHEBI:91054 (2)
CHEBI:132692 (2)
CHEBI:132556 (2)
CHEBI:73072 (2)

Metabolite Name

Glutamic acid (3)
Choline (3)
LysoPE(20:0) (2)
PI(40:3) (2)
Lysine (2)
Beta-alanine (2)
Ornithine (2)
Citric acid (2)
L-threonine (2)
L-glutamine (2)
Tyrosine (2)
Leucine (2)
Phenylalanine (2)
AMP (2)
Glutathione (2)
Coenzyme A (2)
Phosphocholine (2)
Fumaric acid (2)
Taurine (2)
Adenine (2)
Uridine (2)
Glycerophosphocholine (2)
L-Leucine (2)
PE(40:9) (1)
6,7-Epoxyoctadecanoic acid (1)
DiHETrE (1)
DHET (1)
HxB3 (1)
HxA3 (1)
DiHETE (1)

First Public Date

2017 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
+3amu) (1)
15.994915 (1)
42.010565 (1)
57.021464 (1)

Study type

Transcription profiling by array (6)
RNA-seq of coding RNA from single cells (5)
ChIP-seq (4)
RNA-seq of coding RNA (4)
Animal - High-throughput sequencing (1)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (23)
2023 (20)
2025 (14)
2024 (12)
2020 (12)
2019 (12)
2021 (10)
2018 (10)
2013 (9)
2016 (6)
2015 (6)
2017 (6)
2010 (4)
2014 (3)
2009 (3)
2011 (2)
2006 (2)
2012 (1)
2026 (1)

Lab affiliation

Associate Professor Dept. of Pathology and Laboratory Medicine HSRF 218, University of Vermont Larner College of Medicine Burlington, Vermont, 05405, USA (2)
Department of Chemistry, Stanford ChEM-H (2)
Laboratory of Enzymology and Molecular Biology (LEBIMO), Institute of Biology, University of Campinas (UNICAMP) (2)
Porto Conte Ricerche, Alghero, Sardinia, Italy (2)
School of Natural Sciences, Macquarie University, Sydney, Australia (2)
Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, US41 – UMS 2014 – PLBS, F-59000 Lille, France (2)
-Centre of Microbial and Plant Genetics; KU Leuven; Leuven, 3000; Belgium -Center for Microbiology; VIB-KU Leuven; Leuven, 3000; Belgium (1)
1 Centre of Microbial and Plant Genetics; KU Leuven; Leuven, 3000; Belgium 2 Center for Microbiology; VIB-KU Leuven; Leuven, 3000; Belgium (1)
1Department of Biology, Swiss Federal Institute of Technology (ETH), Universitätstrasse 2, 8092 Zürich, Switzerland (1)
1Department of Microbiology, University of Washington, Seattle, Washington, USA (1)
Affiliated hospital of Nantong university (1)
Analytical Biochemistry and Proteomics Unit. IIBCE, Institut Pasteur de Montevideo (1)
Assistant Professor, RTGR (Tomato building), Department of Plant Sciences, School of Life Sciences, University of Hyderabad, Gachibowli, Hyderabad, 500046. (1)
Augusta University (1)
Barnett Institute of Chemical and Biological Analysis, Department of Chemistry and Chemical Biology, Northeastern University, 360 Huntington Ave., Boston, Massachusetts 02115, United States (1)
Bauru School of Dentistry from University of São Paulo (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Building Wuben,School of Basic Medical Sciences,Guizhou Medical University,College Town,Gui’an New District,Guiyang,550025,China (1)
Cambridge Institute for Medical Research, University of Cambridge (1)
Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge, CB2 0XY, UK (1)
Center Leader Proteomics Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS) Technical University Munich (TUM) Gregor-Mendel-Straße 4 85354 Freising GERMANY (1)
Center for Biotechnology & Genomic Medicine, Dept. of Population Health Sciences Medical College of Georgia at Augusta University (1)
Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography and University of California San Diego, 9500 Gilman Dr #0204, La Jolla, CA 92093, USA (1)
Center for Proteomics & Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (1)
Centre de Recherche en Cancérologie de Marseille, CRCM Inserm UMR1068, CNRS UMR7258, Aix Marseille Université U105, Institut Paoli Calmettes France (1)
Centro Nacional de Microbiologia (Instituto de Salud Carlos III) (1)
Chair of Proteomics and Bioanalytics, Technische Universitaet Muenchen (1)
Chang Gung University Department of Medical Biotechnology and Laboratory Science (1)
Chemical and Biological Engineering, The Hong Kong University of Science and Technology (HKUST), Hong Kong (1)
Chongqing Medical University (1)

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^{Photon-counting distributed free-space spectroscopy}.

Not available

S-EPMC8511071 | biostudies-literature

Single-quantum dot imaging with a photon counting camera.

Not available

S-EPMC2830710 | biostudies-literature

Robust micro-flow LC-MS/MS for proteome analysis – 38,000 runs and counting

Micro-flow liquid chromatography tandem mass spectrometry (µLC–MS/MS) is increasingly becoming an alternative to nano-LC–MS/MS for the analysis of proteomes. We have recently demonstrated the potential of a µLC–MS/MS system operating with a 1 mm i.d. × 150 mm column and at a flow rate of 50 µl/min f...

ORGANISM(S): Homo sapiens (Human)

2021-02-22 | PXD023650 | Pride

Comparison of (14)C liquid scintillation counting at NIST and NRC Canada.

Not available

S-EPMC4937459 | biostudies-literature

Voxelwise characterization of noise for a clinical photon-counting CT scanner with a model-based iterative reconstruction algorithm.

Not available

S-EPMC11695565 | biostudies-literature

DsbA plays a critical and multi-faceted role in the production of secreted virulence factors by Erwinia carotovora

Erwinia carotovora subsp. atroseptica (Eca) is an enterobacterial phytopathogen causing economically-significant soft rot disease. Pathogenesis is mediated by multiple secreted virulence factors, many of which are secreted by the Type II (Out) secretion system. DsbA catalyses the introduction of dis...

ORGANISM(S): Pectobacterium carotovorum

2010-06-20 | E-GEOD-10647 | biostudies-arrayexpress

Multicolor spectral photon-counting computed tomography: in vivo dual contrast imaging with a high count rate scanner.

Not available

S-EPMC5500581 | biostudies-literature

Theoretical and experimental analysis of photon counting detector CT for proton stopping power prediction.

Not available

S-EPMC6234096 | biostudies-literature

High-Precision Detection of Cellular Drug Response Based on SERS Spectrum and Multivariate Statistical Analysis.

Not available

S-EPMC9954555 | biostudies-literature

Proteomic analysis of three Borrelia burgdorferi sensu lato species and disseminating clones: relevance for Lyme vaccine design.

Lyme borreliosis is first characterized by a cutaneous inflammation, the erythema migrans, and if dissemination occurs after an infected tick bite cutaneous, nervous and articular manifestations appear. Although antibiotic treatments are efficient in the early stage of the infection, a significant n...

ORGANISM(S): Borrelia burgdorferi 297

2015-02-16 | PXD000876 | Pride

Lyme borreliosis / virulence / comparative proteomics / spectral counting

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456 Results

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Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

CHEBI ID

Metabolite Name

First Public Date

Modification

Study type

Release Date

Lab affiliation

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