Spermatocytes - OmicsDI

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Organisms

Mus musculus (278)
Drosophila melanogaster (28)
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Sus scrofa (6)
Oncorhynchus mykiss (2)
Pimephales promelas (2)
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Tissue

Testis (20)
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Disease

Normal (1)
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CHEBI ID

CHEBI:176360 (1)
CHEBI:176357 (1)
CHEBI:176349 (1)
CHEBI:176345 (1)
CHEBI:31968 (1)
CHEBI:176352 (1)
CHEBI:31442 (1)
CHEBI:28299 (1)
CHEBI:75632 (1)
CHEBI:75643 (1)
CHEBI:176355 (1)
CHEBI:80441 (1)
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CHEBI:168278 (1)
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CHEBI:176410 (1)
CHEBI:176409 (1)
CHEBI:174937 (1)
CHEBI:138490 (1)
CHEBI:168901 (1)
CHEBI:176408 (1)

Metabolite Name

Malvidin 3-O-arabinoside (1)
Peonidin 3-O-arabinoside (1)
Peonidin 3-O-galactoside (1)
Pelargonidin 3-O-arabinoside (1)
Pelargonidin 3-O-galactoside (1)
Cyanidin 3-O-arabinoside (1)
Delphinidin 3-O-rutinoside (1)
Cyanidin 3-O-glucoside (1)
Cyanidin 3-O-rutinoside (1)
PS(O-42:7) PS(P-42:6) (1)
PS(O-42:6/P-42:5)d (1)
PS(O-42:6/P-42:5)b (1)
PS(O-42:6/P-42:5)a (1)
PS(O-42:5/P-42:4) (1)
PS(O-42:3/P-42:2) (1)
PS(O-42:2) PS(P-42:1) (1)
PS(O-40:6/P-40:5)c (1)
PS(O-40:6) PS(P-40:5)b (1)
PS(O-40:6) PS(P-40:5)a (1)
PS(O-40:5/P-40:4)c (1)
PS(O-40:5/P-40:4)b (1)
PS(O-40:5) PS(P-40:4)a (1)
PS(O-40:4/P-40:3) (1)
PS(O-40:3) PS(P-40:2) (1)
PS(O-40:2/P-40:1) (1)
PS(O-40:0) (1)
PS(O-38:6) PS(P-38:5) (1)
PS(O-38:5) PS(P-38:4) (1)
PS(O-38:4/P-38:3) (1)
PS(O-38:3/P-38:2) (1)

First Public Date

2026 (54)
2014 (48)
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2018 (16)
2016 (16)
2017 (15)
2015 (7)

Study type

Transcription profiling by array (44)
RNA-seq of coding RNA (21)
ChIP-seq (14)
RNA-seq of non coding RNA (10)
ChIP-chip by tiling array (4)
RNA-seq of coding RNA from single cells (3)
Unknown experiment type (2)
Other (2)
Methylation profiling by high throughput sequencing (2)
Transcription profiling by SAGE (1)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Bisulfite-seq (1)
ATAC-seq (1)
MicroRNA profiling by array (1)

Release Date

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2017 (56)
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2011 (39)
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2009 (31)
2008 (25)
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2004 (14)
2005 (13)
2026 (12)
2006 (10)
2003 (6)
2001 (4)
2000 (4)
1998 (3)
2002 (2)
1999 (2)
1997 (1)

Lab affiliation

City University of Hong Kong (3)
Cornell University (2)
Shandong University (2)
Biogenouest Proteomics Core Facility IRSET – INSERM U1085 Rennes, France (1)
Carnegie Institution for Science Dept. of Embryology 3520 San Martin Dr Baltimore, MD 21218 (1)
College of Biology, hunan University, China (1)
Deparment of Molecular Biology and Genetics Aarhus University, Denmark (1)
Department of Biochemistry and Molecular Biology, State Key Laboratory of Common Mechanism Research for Major Diseases, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, and Peking Union Medical College, Beijing 100005, China (1)
Department of Molecular Biology and Genetics, Aarhus University, Denmark (1)
Department of Urology & Andrology, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, 310016, China. (1)
Dr. Jeremy Balsbaugh, Proteomics & Metabolomics Facility, Center for Open Research Resources & Equipment University of Connecticut Storrs, CT 06269 (1)
EDyP (1)
EDyP/BGE/IRIG/CEA Grenoble (1)
Epigenetics and Stem Cell Biology Laboratory; National Institute of Environmental Health Sciences; National Institutes of Health (1)
Institute for Genetics and Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Joseph-Stelzmann-Strasse 26, 50931 Cologne, Germany. Center for Molecular Medicine (CMMC), University of Cologne, 50931 Cologne, Germany (1)
Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany; Institute of Biochemistry II, Faculty of Medicine, Goethe University, Frankfurt am Main, Germany; Cardio-Pulmonary Institute, Frankfurt am Main, Germany (1)
Laboratory for Functional Genome Analysis LAFUGA, Gene Center, LMU München, München, Germany (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University (1)
State Key Laboratory of Reproductive Medicine and Offspring Health, Nanjing Medical University, Nanjing 211166, China (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing 211166, Jiangsu, China (1)
State Key Laboratory of Reproductive Medicine, Department of Histology and Embryology, Nanjing Medical University, Nanjing, Jiangsu 210029, China. (1)
State Key Laboratory of Reproductive Medicine. Department of Histology and Embryology, Nanjing Medical University, Nanjing, China. (lab head) (1)
Univ. Grenoble Alpes, INSERM U1038, CEA, BIG-BGE, Grenoble, France. (1)
Yale University (Keck MS & Proteomics Resource) (1)

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phosphoproteomics analysis of mouse spermatocytes

The phosphoproteome changes were quantified in HaspinΔN/ΔN mice spermatocytes by LC-MS/MS.

ORGANISM(S): Mus musculus (Mouse)

2026-08-26 | PXD062103 | Pride

Spatial quantitative proteomics analysis of mouse pachytene, diplotene and metaphase I spermatocytes and human pachytene spermatocytes of MA and OA patients

In order to detect precious clinical FFPE samples at single-cell resolution, we optimized a method suitable for low-input spatial proteomics based on laser capture microdissection (LCM), and successfully identified nearly 2,000 proteins in about 100 spermatocytes cut from formalin-fixed paraffin-emb...

ORGANISM(S): Mus musculus (Mouse) Homo sapiens (Human)

2026-10-02 | PXD072630 | Pride

Spatial proteomics Human Spermatocytes Mouse

Expression data of pachytene spermatocytes and round spermatids from young and aged Brown Norway rats

Male fertility and testis function changes with age and so it was sought to determine if these changes are accompanied by changes in gene expression. A full genome microarray was used to determine if distinct pathways of genes were altered in expression in germ cells (pachytene spermatocytes or roun...

ORGANISM(S): Rattus norvegicus

2012-01-06 | E-GEOD-29963 | biostudies-arrayexpress

Alkbh1/Tzfp Repress a Non-Repeat piRNA Cluster in Pachytene Spermatocytes

Piwi proteins and Piwi-interacting small RNAs (piRNAs) have known functions in transposon silencing in the male germline of fetal and newborn mice. Both are also necessary for spermatogenesis in adult testes, however, their function here remains a mystery. Here, we use germ cell isolations and small...

ORGANISM(S): Mus musculus

2012-09-11 | E-GEOD-37150 | biostudies-arrayexpress

Round Spermatids and Pachytene Spermatocytes

Mouse Round Spermatids (Sptd) and Pachytene Spermatocytes (Spcy)

ORGANISM(S): Mus musculus

2010-06-10 | E-GEOD-1768 | biostudies-arrayexpress

γH2AX-associated RNA in mouse spermatocytes

PRJNA765741 | ENA

In situ transcriptomic analysis of spermatocytes in non-obstructive azoospermia reveals senescence-like states in arrested spermatocytes

PRJNA997931 | ENA

DIS3 ablation in spermatocytes causes defective spermatogenesis in mice

PRJNA1148489 | ENA