Sort   by:  
 Page size 
ProteomicsLong-read Proteogenomics Internal Standard triggered PRM (LRP-IS-PRM)
Long-read proteogenomic data was used to create sample-matched protein database for WTC11 sample. This includes many potential alternative protein isoforms (major and minor isoforms) per gene. The IS-PRM method called Tomahto was tested versus DDA to demonstrate improved coverage of isoform-specific...
ORGANISM(S): Homo sapiens (Human) 
2024-07-17 | PXD050909 | Pride
Proteogenomics Is-prm Tomahto 
ProteomicsLong-read Proteogenomics Internal Standard triggered PRM (LRP-IS-PRM)
Long-read proteogenomic data was used to create sample-matched protein database for WTC11 sample. This includes many potential alternative protein isoforms (major and minor isoforms) per gene. The IS-PRM method called Tomahto was tested versus DDA to demonstrate improved coverage of isoform-specific...
ORGANISM(S): Homo sapiens (Human) 
2024-07-17 | PXD050904 | Pride
Proteogenomics Is-prm Tomahto 
ProteomicsEnhanced sample multiplexing-based targeted proteomics with intelligent data acquisition
Targeted proteomics has been playing an increasingly important role in hypothesis-driven protein research and clinical bi-omarker discovery. We have previously created a workflow, Tomahto, to enable real-time targeted pathway proteomics assays using two-dimensional multiplexing technology. Coupled w...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-08-14 | MSV000095604 | MassIVE
UnknownIS-PRM-Based Peptide Targeting Informed by Long-Read Sequencing for Alternative Proteome Detection.
Not available
S-EPMC11544703 | biostudies-literature
UnknownIS-PRM-based peptide targeting informed by long-read sequencing for alternative proteome detection.
Not available
S-EPMC11014528 | biostudies-literature
ProteomicsSample multiplexing for targeted pathway proteomics: application to aging mice
Pathway proteomics strategies measure protein expression changes in specific cellular processes that carry out related functions. Using targeted TMT-based sample multiplexing, hundreds of proteins can be quantified across 10 or more samples simultaneously. To facilitate these highly complex experi...
ORGANISM(S): Mus musculus (Mouse) 
2020-04-27 | PXD017385 | Pride
Isobaric labeling Real-time instrument control Tissue-specific aging Tomahto Targeted pathway proteomics 
UnknownSample multiplexing for targeted pathway proteomics in aging mice.
Not available
S-EPMC7211924 | biostudies-literature
Sort   by:  
 Page size