Tong Cao C - OmicsDI

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Unknown (965)
Proteomics (50)
Transcriptomics (12)
Genomics (3)
Metabolomics (3)
Other (1)

Organisms

Homo sapiens (25)
Aerococcus urinae NBRC 15544 = CCUG 36881 (23)
Andropogon gerardi (23)
Bacteria (23)
Bartonella quintana JK 31 (23)
Canis lupus familiaris (23)
Cnidaria (23)
Ectopseudomonas oleovorans CECT 5344 (23)
Ensifer adhaerens (23)
Halictus scabiosae (23)
Human immunodeficiency virus 1 (23)
Mesocricetus auratus (23)
Miscanthus x giganteus (23)
Morchella importuna (23)
Mus musculus (23)
Panicum virgatum (23)
Pseudomonas aeruginosa PA103 (23)
Pseudomonas aeruginosa SJTD-1 (23)
Rabies virus Nishigahara RCEH (23)
Rattus norvegicus (23)
Rattus rattus (23)
Yersinia pestis CO92 (6)
Mus musculus (3)
Schizosaccharomyces pombe (1)
Saccharomyces cerevisiae (1)
Candida albicans (1)
Rattus norvegicus (1)
Drosophila melanogaster (1)
Olivierus martensii (1)
Ovis aries (1)

Repository

pride (23)
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biostudies-arrayexpress (14)
PeptideAtlas (11)
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Tissue

Plasma Non-glyco (11)
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Pancreatic islet cell (1)
Whole body (1)

Disease

Lung cancer (2)
Not Available (1)
Influenza (1)
Multiple myeloma (1)
Type 2 diabetes mellitus (1)

Technology Type

Mass Spectrometry (23)
Shotgun proteomics (9)
Bottom-up proteomics (5)
Data-dependent acquisition (3)
Gel-based experiment (3)
Mass spectrometry (2)
Data-independent acquisition (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Glycoproteomics (1)

Instrument Platform

TripleTOF 5600 (12)
Illumina NovaSeq 6000 (3)
Illumina HiSeq 4000 (2)
Liquid Chromatography MS - positive - reverse phase (2)
Liquid Chromatography MS - negative - reverse phase (2)
Vortex (1)
Illumina HiSeq 2500 (1)
Instrument (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2015 (12)
2025 (10)
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2016 (5)
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2013 (3)
2019 (3)
2006 (2)
2008 (1)
2004 (1)
2018 (1)

UNIPROT ID/AC

A0A024RC46 (11)
B3KML9 (11)
B3KT93 (11)
B4DRV9 (11)
B4E3A4 (11)
E9PB61 (11)
G5E972 (11)
G8JLB6 (11)
H0YAR2 (11)
H0YJH7 (11)
I3L4N8 (11)
J9JID7 (11)
O00148 (11)
O00571 (11)
O15523 (11)
O43143 (11)
O43390 (11)
O60506 (11)
O60832 (11)
O94973 (11)
O95678 (11)
O95782 (11)
O95782-2 (11)
P02533 (11)
P02538 (11)
P02545 (11)
P02545-2 (11)
P02545-3 (11)
P02786 (11)
P04259 (11)

ENSEMBL ID

ENSG00000170477 (9)
ENSG00000247315 (4)
ENSG00000147251 (1)

CHEBI ID

CHEBI:166709 (2)
CHEBI:149773 (2)
CHEBI:81256 (2)
CHEBI:8087 (2)
CHEBI:28315 (2)
CHEBI:16562 (2)
CHEBI:64564 (2)
CHEBI:5417 (2)
CHEBI:73025 (2)
CHEBI:24266 (2)
CHEBI:62462 (2)
CHEBI:27386 (2)
CHEBI:28238 (2)
CHEBI:15584 (2)
CHEBI:29888 (2)
CHEBI:26984 (2)
CHEBI:17553 (2)
CHEBI:33508 (2)
CHEBI:48430 (2)
CHEBI:52022 (2)
CHEBI:46961 (2)
CHEBI:16440 (2)
CHEBI:15611 (2)
CHEBI:16680 (2)
CHEBI:16344 (2)
CHEBI:22660 (2)
CHEBI:184023 (2)
CHEBI:18261 (2)
CHEBI:18257 (2)
CHEBI:16525 (2)

Metabolite Name

Pyrophosphate (3)
Taurine (3)
Xanthine (3)
Uridine (3)
D-Glucuronic acid (2)
Oxoglutaric acid (2)
2-Ketobutyric acid (2)
Isovalerylglycine (2)
4-Hydroxyphenylpyruvic acid (2)
Ketoleucine (2)
2-Hydroxy-3-methylbutyric acid (2)
N-Acetyl-beta-alanine (2)
Phenylacetylglutamine (2)
N-Acetylglutamic acid (2)
Deoxyuridine (2)
13S-hydroxyoctadecadienoic acid (2)
2-Isopropylmalic acid (2)
ADP (2)
Xanthurenic acid (2)
Indolelactic acid (2)
Benzoic acid (2)
L-Threonine (2)
Allantoin (2)
D-Fructose 6-phosphate (2)
Cortisone (2)
N-Acetylneuraminic acid (2)
Xanthosine (2)
Taurocholic acid (2)
Deoxycholic acid (2)
Cholic acid (2)

Study type

Transcription profiling by array (4)
ChIP-chip by array (2)
ChIP-seq (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of coding RNA (2)
ChIP-chip by tiling array (1)
Spatial transcriptomics by high-throughput sequencing (1)

Release Date

2025 (162)
2022 (148)
2024 (137)
2023 (129)
2021 (94)
2020 (62)
2019 (50)
2016 (34)
2018 (33)
2017 (31)
2026 (27)
2015 (18)
2013 (15)
2014 (15)
2011 (7)
2006 (4)
2005 (3)
2008 (2)
2012 (2)
2010 (2)
2009 (2)
2004 (1)
2000 (1)

Lab affiliation

State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, China. (3)
wuhan union hospital (3)
1 National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research); NHC Key Laboratory of Parasite and Vector Biology; WHO Collaborating Center for Tropical Diseases; National Center for International Research on Tropical Diseases, Shanghai 200025, China 2 The School of Global Health, Chinese Center for Tropical Diseases Research, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China (1)
1Ruijin Yangtze River Delta Health Institute, Wuxi Branch of Ruijin Hospital, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. 2Department of Endocrine and Metabolic Diseases, Shanghai Institute of Endocrine and Metabolic Diseases, State Key Laboratory of Medical Genomics, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, 200030, China (lab head) (1)
Bio-X Institutes, Key Laboratory for the Genetics of Developmental and Neuropsychiatric Disorders, Ministry of Education, Shanghai Jiao Tong University, Shanghai, China (1)
China-Japan Friendship Hospital, China (1)
Department of Biochemistry and Molecular Cell Biology, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, P.R. China (1)
Department of General Surgery, Pancreatic Disease Center, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
Hospital for Sick Children, University of Toronto, Toronto, Ontario, Canada (1)
Interdisciplinary Research Center on Biology and Chemistry, State Key Laboratory of Chemical Biology, Shanghai Institute of Organic Chemistry, Chinese Academy of Sciences, Shanghai 201210, China (1)
Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (1)
Shanghai Jiao Tong University School of Medicine (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China. (1)
State Key Laboratory of Microbial Metabolism, Laboratory of Analytical Biochemistry and Bioseparation, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China (1)
State Key Laboratory of Microbial Metabolism, School of Life Science and Biotechnology, Shanghai Jiao Tong University (1)
State Key Laboratory of Microbial Metabolism,School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China (1)

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ciliary proteins of Chlamydomonas

We revealed the systematic regulation of ciliary composition in WT and the transition zone muntants.

ORGANISM(S): Chlamydomonas reinhardtii

2022-08-12 | PXD033090 | Pride

Transition zone Cilia

3DMMS: robust 3D Membrane Morphological Segmentation of C. elegans embryo.

Not available

S-EPMC6454620 | biostudies-literature

3D Printing of Stretchable, Adhesive and Conductive Ti₃C₂T_x-Polyacrylic Acid Hydrogels.

Not available

S-EPMC9147333 | biostudies-literature

Glycoprotein 2(GP2) glycosylation

The GP2 was extracted from surgically excised pancreas and its N-glycans were identified using mass gel-based proteomics.

ORGANISM(S): Homo sapiens (Human)

2025-05-23 | PXD055045 | Pride

Human Pancreas Lc-ms/ms

Transcription profiling of human fibroblasts subjected to DNA damage reveals ATM-dependent regulation of gene expression

The relationships between profiles of global gene expression and DNA damage checkpoint functions were studied in cells from patients with ataxia telangiectasia (AT). Three telomerase-expressing AT fibroblast lines displayed the expected hypersensitivity to ionizing radiation (IR) and defects in DNA...

ORGANISM(S): Homo sapiens

2008-06-15 | E-GEOD-6971 | biostudies-arrayexpress

Cancer Cell Derived Small Extracellular Vesicles Contribute to Recipient Cell Metastasis Through Promoting HGF/c-Met Pathway.

Not available

S-EPMC6683008 | biostudies-literature

MOF-Transformed In₂O_3-x@C Nanocorn Electrocatalyst for Efficient CO₂ Reduction to HCOOH.

Not available

S-EPMC9385936 | biostudies-literature

Association of systemic inflammatory markers with white matter hyperintensities and microstructural injury: an analysis of UK Biobank data.

Not available

S-EPMC11771994 | biostudies-literature

Genetic Diversity and Connectivity of Ocypode ceratophthalmus in the East and South China Seas and Its Implications for Conservation.