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TranscriptomicsTranslational regulation of Anopheles gambiae mRNAs in the midgut during Plasmodium falciparum infection
Malaria is caused by Plasmodium parasites, which are transmitted via the bites of infected Anopheline mosquitoes. Midgut invasion is a major bottleneck for Plasmodium development inside the mosquito vectors as a rapidly responding immune system recognizes ookinetes and recruits killing factors from ...
ORGANISM(S): Anopheles gambiae 
2012-09-21 | E-GEOD-38707 | biostudies-arrayexpress
ProteomicsBiophysical and proteomic analyses suggest functions of Pseudomonas syringae pv tomato DC3000 extracellular vesicles in bacterial growth during plant infection
Vesiculation is a process employed by Gram-negative bacteria to release extracellular vesicles (EVs) into the environment. Bacterial EVs contain molecular cargo from the donor bacterium and play important roles in bacterial survival and growth. Here, we describe EV production in plant-pathogenic Pse...
ORGANISM(S): Pseudomonas syringae pv. tomato str. DC3000 
2023-10-24 | PXD023971 | Pride
Pattern-triggered immunity Proteomics Arabidopsis thaliana Nta Pto dc3000 Extracellular vesicles Pti Nanoparticle tracking analysis Evs 
TranscriptomicsGlobal transcriptome analysis of the pH regulator pacC in Colletotrichum gloeosporioides
Colletotrichum gloeosporioides, a widely distributed economically important agent in postharvest fruit disease thrives by massive secretion of ammonia to alkalize its environment and activate its pathogenicity genes. We sequenced the C. gloeosporioides transcriptomes of WT and a M-bM-^HM-^FpacC muta...
ORGANISM(S): Colletotrichum gloeosporioides 
2013-11-21 | E-GEOD-41844 | biostudies-arrayexpress
UnknownMicroRNA-146a promote cell migration and invasion in human colorectal cancer via carboxypeptidase M/src-FAK pathway.
Not available
S-EPMC5410254 | biostudies-literature
ProteomicsA cell-free platform for characterizing and producing therapeutic bacteriophages against biohazardous and antibiotic-resistant bacteria
Bacteriophages are potent therapeutics against biohazardous bacteria that are rapidly acquiring multidrug resistance. However, routine administration of bacteriophage therapy is currently impeded by a lack of safe phage production methodologies and insufficient phage characterization. We thus develo...
ORGANISM(S): Eggerthella phage P3 Enterobacteria phage T7 Escherichia coli Bacteria 
2022-07-20 | PXD019543 | Pride
E. coli Bacteriophage 
ProteomicsPreparation of a high expression yield bacterial cell extract via lysozyme-assisted sonication
One of the central goals for the development of cell-free (CF) gene expression systems is to ensure reproducible expression of proteins at high quality and yield. Over the past decades, starting from crude cell extracts, a variety of successful preparation protocols have been developed and optimized...
ORGANISM(S): Escherichia coli BL21(DE3) 
2021-08-05 | PXD024458 | Pride
Synthetic biology Cell-free protein expression In vitro transcription-translation Phage assembly Bacterial cell extract 
ProteomicsTowards understanding male infertility after spinal cord injury through quantitative proteomics
The study of male infertility after spinal cord injury (SCI) has enhanced the understanding of seminal plasma (SP) as an important regulator of spermatozoa function. However, the most important factors leading to the diminished sperm motility and viability observed in semen of men with SCI remained ...
ORGANISM(S): Homo sapiens (Human) 
2016-02-01 | PXD002145 | Pride
Anejaculation Human seminal plasma Spinal cord injury Male infertility Quantitative proteomics Lc-ms/ms 
ProteomicsAwakening of the RuMP cycle for partial methylotrophy in the thermophile Parageobacillus thermoglucosidasius
Given sustainability and scalability concerns of using sugar feedstocks for microbial bioproduction of bulk chemicals, widening the feedstock range for microbial cell factories is of high interest. Methanol is a one-carbon alcohol that stands out as an alternative feedstock for the bioproduction of ...
ORGANISM(S): Parageobacillus thermantarcticus 
2025-06-16 | PXD058329 | Pride
Synthetic methylotrophy Thermophile Rump cycle P. thermoglucosidasius Methanol dehydrogenase 
ProteomicsFaecal Proteases and Immune Signatures Drive Subtype-Specific Enteric Neuronal Activation in IBS
Background: Luminal proteases have been implicated in epithelial barrier dysfunction and visceral hypersensitivity in irritable bowel syndrome (IBS), yet their impact on the enteric nervous system (ENS), the principal regulator of gastrointestinal function, remains unknown. We investigated whether ...
ORGANISM(S): Homo sapiens (Human) 
2026-09-10 | PXD071836 | Pride
Protease-activated receptors (pars) Irritable bowel syndrome Serine and cysteine protease activity Faecal supernatant proteomics Luminal–neuronal signalling axis 
UnknownIdentification of RNU44 as an Endogenous Reference Gene for Normalizing Cell-Free RNA in Tuberculosis.
Not available
S-EPMC9732522 | biostudies-literature
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