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ProteomicsImmunoprecipitation of U2AF2-TurboID-HA
Analysis of U2AF2-TurboID-HA interactions by immunoprecipitation for comparison with proximity labeling. Cells expressing U2AF2 (iU2) fused with TurboID in either the undifferentiated state (D0) or after mesoderm differentiation (D1) were analyzed to identify the interactome and detect changes durin...
ORGANISM(S): Homo sapiens (Human) 
2025-04-13 | PXD062890 | Pride
U2af2 Immunoprecipitation Lcms 
ProteomicsSILAC Mass Spectrometry of U2AF2 Interactome in Resting and Activated CD4 T cells
T cell activation leads to dramatic changes in cellular phenotype. We used activated human CD4 T cells to study how RNA binding proteins define the post-transcriptional landscape. Using RIPseq, we identified the RNA interactome of U2AF2 and show that U2AF2 binds the majority of transcripts that are...
ORGANISM(S): Homo sapiens (Human) 
2016-04-27 | PXD001846 | Pride
Cd4 t cell activation/mrna splicing/rna-binding proteins/u2af 
ProteomicsProtein Interactome of U2AF2 during T cell activation
T cell activation leads to dramatic changes in cellular phenotype. We used activated human CD4 T cells to study how RNA binding proteins define the post-transcriptional landscape. Using RIPseq, we identified the RNA interactome of U2AF2 and show that U2AF2 binds the majority of transcripts that are...
ORGANISM(S): Homo sapiens (Human) 
2016-04-27 | PXD001843 | Pride
Rip mass spectrometry U2af Cd4 t cells Rna-binding proteins 
ProteomicsU2AF2 controls alternative splicing in speckles proximal regions in an RS domain-dependent manner
Splicing factor U2AF2 is known to play a pivotal role for 3' splice site recognition at an early step of spliceosome assembly. Here using proximity labeling and biochemical confirmations, we extend the repertoire of putative functional partners of U2AF2 mainly for splicing, chromatin modification, t...
ORGANISM(S): Homo sapiens (Human) 
2026-03-09 | PXD065448 | Pride
U2af2/ rs domain/ alternative splicing/ nuclear sepckles/ phosphorylation 
TranscriptomicsT cell Activation is Regulated by Assembly of an RNA-binding Interactome Centered on the U2AF Heterodimer that Includes ILF2, SRRM2, and SYNCRIP [RIP-seq]
T cell activation leads to dramatic changes in cellular phenotype. We used CD3/CD28-activated human CD4 T cells to study how RNA binding proteins define the post-transcriptional landscape. Using RIPseq, we identified the RNA interactome of U2AF2 and show at the global level that U2AF2 binds the maj...
ORGANISM(S): Homo sapiens 
2015-11-04 | E-GEOD-62919 | biostudies-arrayexpress
TranscriptomicsBinding sites of Fritillaria borealis U2AF2 expressed in HEK293T cells
The goal of the experiment is to reveal RNA binding preferences of Fritillaria borealis U2AF2 paralogues, using CLIP-seq. Coding sequences of U2AF2alpha, U2AF2beta and Env negative control were fused to a C-terminal V5 tag. Protein expression constructs were transfected in mammalian cell culture. Af...
ORGANISM(S): Homo sapiens 
2026-06-11 | E-MTAB-15845 | biostudies-arrayexpress
GenomicsThe impact of U2AF2 deficiency on gene expression in ovarian cancer cells
The impact of U2AF2 deficiency on gene expression in ovarian cancer cells
PRJNA1247880 | ENA
GenomicsSplicing factor U2AF2 promotes inclusion of exons with poor nucleosome phasing
Splicing factor U2AF2 promotes inclusion of exons with poor nucleosome phasing
PRJNA1126206 | ENA
GenomicsSF3B1 Phosphorylation Prompts U2AF2 Dissociation for Widespread Control of Pre-mRNA Splicing
SF3B1 Phosphorylation Prompts U2AF2 Dissociation for Widespread Control of Pre-mRNA Splicing
PRJNA1298776 | ENA
GenomicsRNA-seq of human HEK293-T cells expressing U2AF2 paralogues of Fritillaria borealis
RNA-seq of human HEK293-T cells expressing U2AF2 paralogues of Fritillaria borealis
PRJEB101596 | ENA
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