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GenomicsChIP-chip of UBX1 in Drosophila embryos at E3-8h time point.
This is a dataset generated by the Drosophila Regulatory Elements modENCODE Project led by Kevin P. White at the University of Chicago. It contains ChIP-chip data on Affymetrix Drosophila Tiling 2.0R arrays for multiple transcription factor antibodies at various time-points of Drosophila development...
ORGANISM(S): Drosophila melanogaster 
2009-05-12 | GSE15992 | GEO
Genomics
Difference comparison of Ultrabitorax-overexpression and wildtype in the posterior silkgland transcriptome of Bombyx mori
PRJNA905723 | ENA
UnknownDiscovery and characterization of an Arabidopsis thaliana N-acylphosphatidylethanolamine synthase.
Not available
S-EPMC2707190 | biostudies-literature
UnknownCdc48 plays a crucial role in redox homeostasis through dynamic reshaping of its interactome during early stationary phase.
Not available
S-EPMC12137173 | biostudies-literature
ProteomicsPhospho-regulation of Cdc48/p97 cofactor protein Shp1/p47 in budding yeast
Shp1/p47 is a cofactor of the Cdc48/p97 complex involved in the energy-dependent segregation of intracellular aggregates and multiprotein complexes. We identified two serine residues (S108 and S315) in the S. Cerevisiae protein Shp1 which increase in phosphorylation upon various cell stresses such a...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-01-30 | PXD035819 | Pride
Ubx domain Stress Phosphorylation Torc1 Protein degradation Ubx1 Proteostasis 
TranscriptomicsLack of Toll-like Receptor Signaling Improves Host Defense in Severe Septic Peritonitis in Severe Septic Peritonitis
TLRs are considered important for innate immune responses that combat bacterial infections. Here, the role of TLRs in severe septic peritonitis using the colon ascendens stent peritonitis (CASP) model was examined. We demonstrate that mice deficient for MyD88 and TRIF had markedly reduced bacterial ...
ORGANISM(S): Mus musculus 
2011-06-27 | E-GEOD-24327 | biostudies-arrayexpress
TranscriptomicsDeficiency in hematopoietic phosphatase Ptpn6/Shp1 hyperactivates the innate immune system and impairs control of bacterial infections in zebrafish embryos
Deficiency in the protein-tyrosine phosphatase SHP1/PTPN6 is linked with hematological malignancies and chronic inflammatory diseases. Here we exploited the embryonic and larval stages of zebrafish as an animal model to study ptpn6 function in the sole context of innate immunity. We show that ptpn6 ...
ORGANISM(S): Danio rerio 
2012-12-31 | E-GEOD-34930 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse C57BL6J and DBA2J strains when Chlamydia infected
C57BL/6J mice were 105-fold more resistant to Chlamydia psittaci infection than DBA/2J mice by LD100 determinations. Linkage analysis using BXD recombinant inbred strains revealed a single effector locus at a 1.5 Mbp region on chromosome 11 encoding a cluster of three p47GTPases (Irgb10, Igtp, and I...
ORGANISM(S): Mus musculus 
2008-06-15 | E-GEOD-7767 | biostudies-arrayexpress
Transcriptomicsngatha mutant inflorescences
Floral organ identities are specified by few transcription factors which act as master regulators. Subsequently, specification of organ axes programs the distribution of distinct tissue types within the organs that themselves develop unique identities. The C-class, AGAMOUS-clade MADS box genes are p...
ORGANISM(S): Arabidopsis thaliana 
2009-04-10 | E-GEOD-15555 | biostudies-arrayexpress
ProteomicsForebrain Hindbrain histone H4 Mus musculus P25 P47
Quantitative top down analysis of histone H4 proteoforms in the mouse forebrain and hindbrain at 25 and 47 days of age.
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
MSV000090249 | MassIVE
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