Sort   by:  
 Page size 
ProteomicsID QC - Peptide identification quality control
Mitochondria sample replicate 1
ORGANISM(S): Homo sapiens (Human) Saccharomyces cerevisiae (Baker's yeast) 
2011-10-10 | PRD000373 | Pride
ProteomicsD-score - D-score: a search engine independent MD-score
Processing of the dataset of synthetic phosphopeptides by Savitzki et al. (MCP, 2011) using multiple search engines. Establishment of the D-score: a search engine independent MD-score.
ORGANISM(S): Homo sapiens (Human) 
2013-01-23 | PXD000021 | Pride
Localization score Phosphorylation Synthetic peptides 
ProteomicsiQUARI - Integral quantification accuracy estimation for reporter ion-based quantitative proteomics (iQuARI)
Study on the MS1 interference problem for reporter ion quantification using orthogonal proteomes: human and pyrococcus furiosus.
ORGANISM(S): Homo sapiens (Human) Pyrococcus furiosus 
2012-08-13 | PXD000013 | Pride
Human Pyrococcus furiosus Itraq 
ProteomicsThe human plasma proteome before and after remote ischemic preconditioning
Six healthy male adults underwent RIPC, consisting of 3x5 min cycles of upper arm ischemia (inflating a blood pressure cuff to >200 mmHg) alternating with 3x5 min reperfusion (bp cuff deflated). Blood samples were collected at baseline and at 1 and 4 min into each reperfusion period. Plasma was isol...
ORGANISM(S): Homo sapiens (Human) 
2014-09-16 | PXD000605 | Pride
Remote ischemic preconditioning Plasma Human 
ProteomicsPlatelet proteome - The first comprehensive and quantitative analysis of human platelet protein composition allows the comparative analysis of structural and functional pathways
iTRAQ quantification of human platelet proteins from four healthy donors measured on an Orbitrap XL.
ORGANISM(S): Homo sapiens (Human) 
2012-08-07 | PRD000665 | Pride
ProteomicsPeptideShaker - A complex standard for protein identification, designed by evolution
Mass spectrometry-based proteomics data, obtained experimentally or via public repositories, remains challenging to analyze. This challenge is particularly felt when re-analysing or re-purposing public data sets, endeavours that otherwise hold great potential. PeptideShaker is an open source system ...
ORGANISM(S): Pyrococcus furiosus 
2014-06-24 | PXD001077 | Pride
Pyrococcus furiosus 
ProteomicsHs_Plasma_iTRAQ4plex
The human plasma proteome before and after remote ischemic preconditioning
ORGANISM(S): Homo Sapiens (human) 
2014-12-31 | PAe005195 | PeptideAtlas
ProteomicsProteogenomic analysis of hiPSC cultures from a healthy donor
Proteogenomic analysis of three stem cell samples from a healthy donor. The cell lines used here are commercially available as induced pluripotent stem cells (iPSC) via retroviral reprogramming of skin fibroblasts isolated from the PGP1 donor from the Personal Genome Project (PGP) (Coriell, GM23338)...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2024-07-03 | MSV000095226 | MassIVE
ProteomicsPeptideShaker - PeptideShaker is a user friendly tool for shotgun proteomic data interpretation and reprocessing.
PeptideShaker is a user friendly tool for shotgun proteomic data interpretation and reprocessing. The present dataset is the example dataset and consists of a single run HeLa measurement.
ORGANISM(S): Homo sapiens (Human) 
2014-01-27 | PXD000674 | Pride
Reprocessing Peptideshaker Protein identification 
ProteomicsSelective targeting of TBXT with DARPins identifies regulatory networks and therapeutic vulnerabilities in chordoma
Aberrant expression of the embryonal transcription factor TBXT (also known as brachyury) drives chordoma, a rare spinal neoplasm with no effective drug therapies. The gene network regulated by TBXT is poorly understood, and strategies to disrupt its abnormal activity for therapeutic purposes are lac...
ORGANISM(S): Homo sapiens (Human) 
2025-07-31 | PXD055982 | Pride
Tbxt Chordoma Darpin Brachyury 
Sort   by:  
 Page size