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This project includes additional data of JPST002405. We conducted a deep proteomic analysis of meconium in 79 newborns to establish a meconium protein profile and gain insights into the underlying causes of neonatal diseases.
ORGANISM(S): Homo Sapiens (human) 
We conducted a deep proteomic analysis of meconium in 259 newborns to establish a meconium protein profile and gain insights into the underlying causes of neonatal diseases.
ORGANISM(S): Homo Sapiens (human) 
In this prospective study, we analyzed stool proteomes from four patients with well-controlled conditions, four patients with recurrent cholangitis, and three patients with prolonged jaundice but no cholangitis, all of whom had undergone Kasai portoenterostomy for biliary atresia (BA). The study als...
ORGANISM(S): Homo Sapiens (human) 
Data-independent acquisition (DIA)-MS analysis overtops the existing data-dependent acquisition (DDA)-MS analysis enabling deep proteome coverage and precise relative quantitative analysis in single-shot LC-MS/MS. We constructed a single-shot LC-MS/MS system with an MS measurement time of 90 min for...
ORGANISM(S): Homo Sapiens (human) Cellular Organisms Mus Musculus (mouse) 
Stool samples from four patients with Biliary atresia (BA) and three patients with neonatal cholestasis of other etiologies (non-BA) were analyzed by overlapping DIA-MS.
ORGANISM(S): Homo Sapiens (human) 
Caecal contents from three specific pathogen-free (SPF) mice, and three germ-free (GF) mice were analyzed by DIA-MS (SWATH-MS) using TripleTOF 5600+ (SCIEX). Paraprevotella clara (P. clara) culture supernatants nontreated and treated tunicamycin or 2-fluro-L-fucose (2F-Fuc) were analyzed by DIA-MS u...
ORGANISM(S): Paraprevotella Clara Mus Musculus (mouse) 
00502 protein derived from Paraprevotella clara, as well as mixture of 00502 protein and human PRSS2 were analyzed by Native-PAGE. The observed bands were cut out and digested in-gel. The digested peptides were analyzed by DDA-MS using Q Exactive HF-X .
ORGANISM(S): Paraprevotella Clara 
IP-MS analysis against endogenous NRDC using megakaryocyte cell lysates.
ORGANISM(S): Homo Sapiens (human) 
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