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TranscriptomicsChemical modifications mark alternatively spliced and actively degrading messenger RNAs in Arabidopsis and humans
Post-transcriptional chemical modification of RNA bases is a widespread and physiologically relevant regulator of RNA maturation, stability, and function. While modifications are best characterized in short, noncoding RNAs such as transfer RNAs (tRNAs), growing evidence indicates that messenger RNAs...
ORGANISM(S): Homo sapiens 
2015-10-31 | E-GEOD-66224 | biostudies-arrayexpress
ProteomicsTranscriptomic and Proteomic Insight into the Mechanism of Cyclooctasulfur- versus Thiosulfate-Oxidation by the Chemolithoautotroph Sulfurimonas denitrificans
Chemoautotrophic bacteria belonging to the genus Sulfurimonas in the class Campylobacteria (formerly classified as Epsilonproteobacteria) play a key role in the sulfur cycle in a variety of oxygen-deficient or –limited and sulfide-rich marine and terrestrial environments. Previously, they were ident...
ORGANISM(S): Sulfurimonas denitrificans 
2019-07-22 | PXD009127 | Pride
Sulfur Campylobacteria Proteomics Oxidation Epsilonproteobacteria 
GenomicsTargets of Ty3 transposition in Saccharomyces cerevisiae
The goal of these experiments was to define the targets of Ty3 transposition in Saccharomyces cerevisiae. Ty3 is a retroviruslike element that is found at the transcription initiation site of chromosomal tRNA genes. A Ty3 that can be induced by growth in galactose-containing medium and which was ma...
ORGANISM(S): Saccharomyces cerevisiae 
2011-09-02 | E-GEOD-31820 | biostudies-arrayexpress
UnknownAccurate quantum-centric simulations of supramolecular interactions.
Not available
S-EPMC11957199 | biostudies-literature
TranscriptomicsTranscription profiling of human pilocytic astrocytoma to develop molecular signatures
Pilocytic astrocytomas (PAs) are the most common glioma in children. While many PAs; are slow growing or clinically indolent, others exhibit more aggressive features with tumor; recurrence and death. In order to identify genetic signatures that might predict PA clinical; behavior, we performed gene ...
ORGANISM(S): Homo sapiens 
2008-06-14 | E-GEOD-5675 | biostudies-arrayexpress
ProteomicsSite-Selective Photocatalytic Functionalization of Peptides and Proteins at Selenocysteine
The importance of modified peptides and proteins for applications in drug discovery, and for illuminating biological processes at the molecular level, has fueled a demand for efficient methods that facilitate the precise modification of these biomolecules. Herein, we describe the development of a ph...
ORGANISM(S): Homo sapiens (Human) 
2022-10-25 | PXD037525 | Pride
Selenocysteine Modification 
TranscriptomicsGenome-wide analysis of esopageal adenocarcinoma tumor biopsy using high-density single-nucleotide polymorphism arrays.
We applied whole-genome single nucleotide polymorphism (SNP) arrays to define a comprehensive genetic profile of 23 esophageal adenocarcinoma (EAC) primary tumor biopsies based on loss of heterozygosity (LOH) and DNA copy number changes. Alterations were common, averaging 97 (range 23-208) per tumor...
ORGANISM(S): Homo sapiens 
2008-06-01 | E-GEOD-10506 | biostudies-arrayexpress
UnknownHigh-performance lasers for fully integrated silicon nitride photonics.
Not available
S-EPMC8599668 | biostudies-literature
UnknownGene expression and cell identity controlled by anaphase-promoting complex.
Not available
S-EPMC7402266 | biostudies-literature
GenomicsDNA methylomes of the fire ant Solenopsis invicta.
We used whole bodies of four different adult fire ant morphs (alate queens, workers, haploid males, and diploid males) from a single polygyne colony to generate single-base resolution DNA methylation maps. DNA was extracted from whole bodies of individual males, individual queens, and pooled workers...
ORGANISM(S): Solenopsis invicta 
2013-03-27 | E-GEOD-39959 | biostudies-arrayexpress
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