Wong A T AT - OmicsDI

Show results for

Unknown (3378)
Transcriptomics (234)
Proteomics (126)
Genomics (63)
Metabolomics (20)

Organisms

Homo sapiens (201)
Mus musculus (114)
Saccharomyces cerevisiae (11)
Rattus norvegicus (10)
Arabidopsis thaliana (10)
Plasmodium falciparum 3D7 (7)
Plasmodium falciparum (4)
Danio rerio (4)
Sus scrofa (4)
Xenopus laevis (4)
Schizosaccharomyces pombe (3)
Glycine max (3)
Vitis vinifera (2)
Caenorhabditis elegans (2)
Gallus gallus (2)
Drosophila melanogaster (2)
Aspergillus fumigatus Af293 (2)
Flaveria cronquistii (1)
Nostoc punctiforme PCC 73102 (1)
Actinosynnema pretiosum (1)
Leishmania major (1)
Chlamydomonas reinhardtii (1)
Nicotiana benthamiana (1)
Medicago truncatula (1)
Nicotiana tabacum (1)
Anopheles gambiae (1)
Ovis aries (1)
Ancylostoma ceylanicum (1)
Aspergillus flavus FRR 342 (1)
Aspergillus fumigatus (1)

Organisms

Plasmodium falciparum 3D7 (6)
Sus scrofa (1)
Medicago truncatula (1)
Rattus norvegicus (1)
Homo sapiens (1)
Mus musculus (1)

Repository

biostudies-arrayexpress (259)
pride (111)
EGA (25)
MetaboLights (20)
MassIVE (11)
ENA (11)
geo (2)
iProX (2)
jPOST (2)

Tissue

Cell culture (22)
Epithelial cell (15)
T cell (9)
Blood plasma (6)
Brain (5)
Kidney (5)
Lung (5)
Permanent cell line cell (4)
Blood (3)
Blood serum (3)
Embryonic stem cell (3)
Plant cell (3)
Colon epithelial cell (2)
Kidney cell (2)
Leaf (2)
Macrophage (2)
Monocyte (2)
Pluripotent stem cell (2)
Prostate adenocarcinoma cell (2)
Retinal ganglion cell (2)
Seedling (2)
Adenohypophysis (1)
Bone (1)
Bone marrow (1)
Bronchial epithelial cell (1)
Culture fluid (1)
Early embryonic cell (1)
Egg (1)
Embryonic fibroblast (1)
HeLa cell (1)

Disease

Colon cancer (11)
Disease free (6)
Prostate adenocarcinoma (3)
Breast cancer (2)
Cystic fibrosis (2)
Inoculated with P. syringae pv. tomato strain DC3000 + avrRps4 (1)
Lymphoblastic leukemia (1)
Ovarian carcinoma (1)
Prostate carcinoma (1)
Alpers-Huttenlocher syndrome (1)
Amyotrophic lateral sclerosis type 1 (1)
Aspergillosis (1)
COVID-19 (1)
Cancer (1)
Cervix carcinoma (1)
Duchenne muscular dystrophy (1)
Immunoglobulin light chain amyloidosis (1)
Influenza (1)
Kabuki syndrome (1)
Long COVID (1)
Lung occult adenocarcinoma (1)
Mature T-cell and NK-cell lymphoma (1)
Mitochondrial metabolism disease (1)
Osteogenesis imperfecta (1)
Proteus syndrome (1)
Pulmonary tuberculosis (1)
Scoliosis (1)
Severe COVID-19 (1)

Technology Type

Mass Spectrometry (111)
Shotgun proteomics (59)
Affinity purification coupled with mass spectrometry proteomics (25)
Mass spectrometry (19)
Bottom-up proteomics (18)
Data-dependent acquisition (6)
Data-independent acquisition (5)
SWATH MS (5)
Top-down proteomics (5)
Gel-based experiment (4)
SRM/MRM (4)
Illumina HiSeq 2000 (1)
Illumina MiSeq, ILLUMINA (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
HDMSE (1)
Olink affinity proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (5)
LTQ Orbitrap Elite (4)
Illumina NovaSeq 6000 (3)
Q Exactive (3)
Gas Chromatography MS - positive (3)
Illumina NovaSeq X (2)
Illumina HiSeq 2000 (2)
Orbitrap Fusion Lumos (2)
Q Exactive Plus (2)
Liquid Chromatography MS - (2)
Liquid Chromatography MS - negative - hilic (2)
Illumina HiSeq 2000 platform (1)
Gene Titan (1)
418 [Affymetrix] (1)
BGISEQ-500 (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 3000 (1)
Illumina HiSeq 4000 (1)
NextSeq 500 (1)
TimsTOF HT (1)
TripleTOF 6600 (1)
6540 Q-TOF LC/MS (Agilent) (1)
Capillary electrophoresis MS - negative (1)
Capillary electrophoresis MS - positive (1)
Diode array detection MS - positive - reverse phase (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - - hilic (1)

Publication Date

2013 (35)
2011 (33)
2012 (30)
2010 (30)
2025 (28)
2014 (26)
2021 (25)
2015 (23)
2022 (22)
2019 (22)
2016 (20)
2008 (20)
2020 (15)
2024 (14)
2009 (13)
2023 (11)
2026 (9)
2007 (9)
2018 (6)
2004 (4)
2017 (3)
2006 (3)
2005 (2)

CHEBI ID

CHEBI:15891 (7)
CHEBI:16335 (6)
CHEBI:17750 (6)
CHEBI:18211 (6)
CHEBI:6650 (6)
CHEBI:7916 (6)
CHEBI:15428 (5)
CHEBI:15611 (5)
CHEBI:16704 (5)
CHEBI:16919 (5)
CHEBI:17126 (5)
CHEBI:17568 (5)
CHEBI:17596 (5)
CHEBI:17748 (5)
CHEBI:26271 (5)
CHEBI:28044 (5)
CHEBI:28300 (5)
CHEBI:29016 (5)
CHEBI:30769 (5)
CHEBI:15318 (4)
CHEBI:15354 (4)
CHEBI:15741 (4)
CHEBI:15746 (4)
CHEBI:15756 (4)
CHEBI:16027 (4)
CHEBI:16566 (4)
CHEBI:16610 (4)
CHEBI:16680 (4)
CHEBI:16750 (4)
CHEBI:16811 (4)

Metabolite Name

Putrescine (4)
Adenosine (3)
Alanine (3)
Asparagine (3)
Aspartate (3)
Beta-alanine (3)
Citrulline (3)
Creatine (3)
Cytidine (3)
Fumarate (3)
Glycine (3)
Isoleucine (3)
N-acetylputrescine (3)
Ornithine (3)
Phenylalanine (3)
Proline (3)
Spermidine (3)
Spermine (3)
Taurine (3)
Threonine (3)
Thymidine (3)
Tryptophan (3)
Uridine (3)
Xanthine (3)
Xanthosine (3)
(-)-epigallocatechin (2)
1-Octen-3-ol (2)
1-linoleoyl-GPC (18:2) (2)
1-methylguanidine (2)
1-methylhistidine (2)

First Public Date

2014 (9)
2025 (1)
2015 (1)

Classification

protozoa (6)

Modification

2x(15)N labeled L-lysine (2)
4x(15)N labeled L-arginine (2)
4x(2)H labeled dimethylated L-lysine (2)
N6 (1)
N6-dimethyl-L-lysine (1)
Not available (1)

Study type

Transcription profiling by array (188)
ChIP-seq (27)
RNA-seq of coding RNA (20)
Methylation profiling by array (5)
Unknown experiment type (3)
RNA-seq of coding RNA from single cells (3)
Genotyping by array (2)
RNA-seq of non coding RNA (2)
RNA-seq of non coding RNA from single cells (1)
Differential (1)
Animal - One-color microarray (1)
ChIP-chip by tiling array (1)
Cell line - One-color microarray (1)
Animal - High-throughput sequencing (1)
RNAi profiling by array (1)
Transcription profiling by RT-PCR (1)
Other (1)

Release Date

2022 (394)
2021 (364)
2024 (359)
2023 (353)
2025 (349)
2020 (238)
2019 (229)
2018 (205)
2015 (165)
2016 (156)
2017 (144)
2014 (129)
2013 (118)
2011 (91)
2012 (85)
2010 (62)
2026 (52)
2009 (43)
2008 (42)
2007 (20)
2006 (12)
2005 (6)
2000 (6)
2004 (5)
2003 (2)
2001 (2)
1999 (2)
1998 (2)
2002 (1)
1997 (1)

Lab affiliation

Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (7)
Department of Proteomics and Signal Transduction, Max-Planck-Institute of Biochemistry, Munich, Germany (4)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia (2)
Department of Biochemistry and Pharmacology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, VIC, Australia. (2)
Department of Medicine, Nephrology and Pharmacological Sciences, Icahn School of Medicine at Mount Sinai (2)
Department of Physiology, Development and Neuroscience, University of Cambridge, Downing Street, Cambridge CB2 3DY, UK. (2)
Division of Life Science, The Hong Kong University of Science and Technology, Hong Kong SAR, China (2)
Lee Kong Chian School of Medicine, School of Biological Sciences, Nanyang Technological University, Singapore (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (2)
Senior Director, Dynamic Omics, CGR, One Medimmune Way Gaithersburg, MD 20878 (2)
The University of Melbourne (2)
1. Department of Renal Medicine, Flinders Medical Centre, South Australia, Australia. 2. College of Medicine and Public Health, Flinders University, South Australia, Australia. (1)
Allakos Inc. (1)
Associate Professor in the Department of Biosciences Durham University UK (1)
Australian Institute of Tropical Health and Medicine, James Cook University, Cairns, Australia (1)
Australian Institute of Tropical Health and Medicine. Centre for Molecular Therapeutics. James Cook Univerisity, Cairns. (1)
Bioprocessing Technology Institute (BTI), Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01 Centros, Singapore 138668, Singapore (1)
Carnegie Institution at Stanford (1)
Carnegie Mass Spec Facility (1)
Carnegie Mass Spectrometry Facility at Stanford (1)
Cell Cycle Unit, Children's Medical Research Institute, 214 Hawkesbury Road, Westmead, NSW 2145, Australia (1)
Cell Fate Engineering and Therapeutics Lab, Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR), 61 Biopolis Drive, Proteos, Singapore 138673, Republic of Singapore (1)
Center for Proteomics and Metabolomics Leiden University Medical Center (1)
Centre for Genomics and Computational Biology Barts Cancer Institute Queen Mary, University of London John Vane Science Centre, Charterhouse Square, London EC1M 6BQ Tel: +44 (0)20 7882 8266 | Fax: +44 (0)20 7882 3891 | Email: p.cutillas@qmul.ac.uk (1)
Centre for Inflammatory Diseases, Department of Medicine, School of Clinical Sciences at Monash Health, Monash University, Clayton, VIC, 3168, Australia. (1)
Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research, Clayton, Victoria, Australia (1)
Centre for Innate Immunity and Infectious Diseases, Hudson Institute of Medical Research, Clayton, Victoria, Australia Department of Molecular and Translational Science, Monash University, Clayton, Victoria, Australia (1)
Centre for Targeted Protein Degradation (CeTPD) University of Dundee (1)
Chemical Proteomics, Division of Chemistry I, MBB Dept., Biomedicum, Karolinska Insitute, Stockholm, Sweden (1)
Chief Scientific Officer oNKo-innate Pty Ltd Laboratory Head, Huntington Laboratory Monash Biomedicine Discovery Institute Monash University Victoria Australia (1)

Tags

pathogen:protozoan (6)
pathogen (6)
xref:PubMed:18582462 (1)
xref:PubMed:25492260 (1)
xref:PubMed:16180142 (1)
xref:PubMed:15150374 (1)

Previous page
1 / 383
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 383
Next page

Sort by:

Relevance

Page size

Withaferin A inhibits LFA-1-stimulated ZAP70 activity and T-cell motility

a steroidal lactone withaferin A (WFA) can inhibit T-cell motility, which is crucial for adaptive immune responses as well as autoimmune reactions. Tandem mass spectrometry identified WFA-interactome in human T-cells that were stimulated to migrate via cross-linking of the lymphocyte function-associ...

ORGANISM(S): Homo sapiens (Human)

2022-02-17 | PXD026508 | Pride

Transcription profiling of human CALM-AF10 positive and negative T-ALL samples

Comparison of a series of 6 CALM-AF10 positive T-ALL to a series of 17 CALM-AF10 negative T-ALL

ORGANISM(S): Homo sapiens

2007-08-30 | E-GEOD-2117 | biostudies-arrayexpress

Integrative proteomics and transcriptomics of human T-cells reveals temporal changes in metabolic pathways following TCR-mediated activation

T-cells are a critical component of the adaptive immune system and play a key role in immunological surveillance. Upon engagement of T-cell receptor (TCR), CD4+ and CD8+ T-cells acquire effector functions through a complex interplay between mRNA and proteins yet to be fully understood. In this study...

ORGANISM(S): Homo sapiens (Human)

2023-12-28 | PXD038810 | Pride

Human t cell activation Dda proteomics Cd8+ t cells Cd4+ t cells

Transcription profiling of mouse naive T cells differentiated under TH1 and TH2 conditions

Naive CD4+ CD62L+ CD25- T cells were differentiated under TH1 and TH2 conditions for 7 days, restimulated with anti-CD3 and anti-CD28 for 24h and sorted for IFN-gamma (TH1) and IL-4 (TH2) production using cytokine secretion assays.

ORGANISM(S): Mus musculus

2009-06-01 | E-MEXP-2153 | biostudies-arrayexpress

Transcription profiling of mouse wild type or Batf deficient T cells cultured under various combinations of IL-6 orTGF-beta

Wild type and Batf deficient T cells were stimulated under various combinations of IL-6 or TGF-beta.

ORGANISM(S): Mus musculus

2009-06-01 | E-MEXP-2152 | biostudies-arrayexpress

Global Transcriptome Analysis and Enhancer Landscape of Human Primary T Follicular Helper and T Effector Lymphocytes (ChIP-Seq)

T follicular helper (Tfh) cells are a subset of CD4+ T helper (Th) cells that migrate into germinal centers and promote B cell maturation into memory B and plasma cells. Tfh cells are necessary for promotion of protective humoral immunity following pathogen challenge, but when aberrantly regulated, ...

ORGANISM(S): Homo sapiens

2014-10-27 | E-GEOD-58595 | biostudies-arrayexpress

Metabolic profiling of prostate cancer in skeletal microenvironments identifies G6PD as a key mediator of growth and survival

The spread of cancer to bone is invariably fatal, with complex cross-talk between tumor cells and the bone microenvironment responsible for driving disease progression. By combining in silico analysis of patient datasets with metabolomic profiling of prostate cancer cells cultured with bone cells...

2024-08-19 | MTBLS3973 | MetaboLights

P. falciparum (lab strain 3d7) schizonts treated with A23187 vs P. falciparum (lab strain 3d7) reference RNA pool

Calcium is a universal second messenger molecule which plays a significant role in several biological processes. Presence of calcium sensors (calmodulins) and calcium-dependent protein kinases in Plasmodium species suggests an important role of calcium-dependent signaling pathways in the regulation ...

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-14 | E-GEOD-33797 | biostudies-arrayexpress

P. falciparum (lab strain 3d7) schizonts untreated control vs P. falciparum (lab strain 3d7) reference RNA pool

ORGANISM(S): Plasmodium falciparum 3D7

2012-07-14 | E-GEOD-33795 | biostudies-arrayexpress

Mature thymic NKT and T cells

Invariant Natural killer T (iNKT) cells are a separate lineage of T lymphocytes with innate effector functions. They express an invariant TCR specific for lipids presented by CD1d and their development and effector differentiation rely on a unique gene expression program. We asked whether this progr...

ORGANISM(S): Mus musculus

2010-04-09 | E-GEOD-15925 | biostudies-arrayexpress

Previous page
1 / 383
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 383
Next page

Sort by:

Relevance

Page size

3821 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

CHEBI ID

Metabolite Name

First Public Date

Classification

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets