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TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Transcriptomes for Wild Type and Mutants including opaque2, PbfRNAi and PbfRNAi;o2 in Zea mays
The goals of this study are to study the regulatory network of the two maize endosperm-specific transcription factors O2 and PBF by 16-DAP endosperm transcriptome profiling (RNA-seq) of their mutants and wild type. The results utilize the expression pattern of global genes regulated by PBF and O2 to...
ORGANISM(S): Zea mays 
2016-03-24 | E-GEOD-79513 | biostudies-arrayexpress
UnknownAnatomical, Physiological, and Transcriptome Analyses Revealing Pod Shattering of <i>Medicago ruthenica</i> Associated with Pericarp Lignin Biosynthesis.
Not available
S-EPMC12467310 | biostudies-literature
TranscriptomicsTranscriptome sequencing of Pteropus alecto and Myotis davidii
Deep sequencing of mRNA from Pteropus alecto and Myotis davidii Analysis of ploy(A)+ RNA of Pteropus alecto and Myotis davidii
ORGANISM(S): Pteropus alecto 
2012-12-18 | E-GEOD-39933 | biostudies-arrayexpress
TranscriptomicsThe transcriptome sequencing of yak (Bos grunniens)
Deep sequencing of mRNA from 6 organs of yak (Bos grunniens) Analysis of ploy(A)+ RNA of brain,heart,liver,lung,spleen, and stomach of yak (Bos grunniens)
ORGANISM(S): Bos grunniens 
2012-05-18 | E-GEOD-33300 | biostudies-arrayexpress
ProteomicsProteomic analysis of human circulating neutrophils upon multi states
Neutrophils exhibited remarkable plasticity and heterogenicity in both homeostasis and pathology conditions. Here, we conducted a “multi-states” proteomics methodology to explore how neutrophils respond upon infection and inflammation stress including bacterial analog LPS, virus analog Poly(I:C), pr...
ORGANISM(S): Homo Sapiens 
2024-12-23 | PXD059138 |
ProteomicsAnalysis of intact S-acylated peptides by ssMLCC
Enrichment of metabolically labelled intact S-acylated peptides and subsequent analysis by LC-MS/MS
ORGANISM(S): Homo Sapiens 
2023-12-10 | PXD047685 |
ProteomicsComprehensive Proteomic Characterization of Scar Formation in Urethral Stricture Disease
Male urethral stricture disease (USD) is characterized by scar formation, whose molecular mechanism is still lack. In this study, we performed comprehensive proteomic landscape of USD with 12 scar tissues and 5 matched normal adjacent tissues (NATs). Comparative analysis disclosed the ECM signaling ...
ORGANISM(S): Homo Sapiens 
2024-06-18 | PXD053186 |
ProteomicsProteome-wide Hyposuccinylation of Esophageal Squamous Cell Cancer to Promotion of Tumor Metabolism and Migration
We identify abnormal protein and post-translational modification (PTM) pathways, including significantly downregulated lysine succinylation sites in cancer cells. Focusing on hyposuccinylation, we reveal that this altered PTM was enriched on enzymes of metabolic pathways inextricably linked with can...
ORGANISM(S): Homo Sapiens 
2020-09-18 | PXD021567 |
ProteomicsHistone PTMs dataset for Hyposuccinylation Derived from Abnormal Metabolism Promotes the Cell Migration of Esophageal Squamous Cell Cancer
We identify abnormal protein and post-translational modification (PTM) pathways, including many downregulated lysine succinylation sites in cancer cells. Focusing on hyposuccinylation, we reveal that this altered PTM was enriched on enzymes of metabolic pathways and the reduced succinyl-CoA may lead...
ORGANISM(S): Homo Sapiens 
2020-09-26 | PXD021700 |
ProteomicsMouse Testis IP-MS Analysis of TEX44 Interacting Proteins
Through whole-exome sequencing of 800 patients with asthenozoospermia, we identified biallelic TEX44 variants in six individuals, all of whom exhibited defective mitochondrial sheath assembly and impaired sperm motility. Using Tex44 knockout mice, we demonstrated that TEX44 interacts with carnitine ...
ORGANISM(S): Mus Musculus 
2025-02-20 | PXD060989 |
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