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ProteomicsAn integrated workflow for cross-linking/mass spectrometry
We present a concise workflow to enhance the mass spectrometric detection of cross-linked peptides by introducing sequential digestion and the database search software Xi. We use sequential digestion to reduce the peptide size and increase identification rates. The methodology is independent of samp...
ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) Gallus gallus (Chicken) Saccharomyces cerevisiae (Baker's yeast) Chaetomium thermophilum Equus caballus (Horse) 
2019-08-27 | PXD008550 | Pride
Xi Sequential digestion Cross-linking mass spectrometry 
ProteomicsMass spec analysis of the sequences of proteins snFPITE-n1 and snFPITE-n2 from Sipunculus nudus
In this project, we purified proteins snFPITE-n1 and snFPITE-n2 from Sipunculus nudus, digested the proteins and determined the sequences of the proteins by Mass spec analysis. We have a database of the sequences of snFPITE proteins from Sipunculus nudus and we used the Mass spec results to search f...
ORGANISM(S): Sipunculus nudus 
2025-04-03 | PXD043675 | Pride
Sipunculus nudus Mass spec 
UnknownCharacterization of Xi-class mycothiol S-transferase from Corynebacterium glutamicum and its protective effects in oxidative stress.
Not available
S-EPMC6815410 | biostudies-literature
UnknownPhysiological Changes and Differential Gene Expression of Tea Plants (Camellia sinensis (L.) Kuntze var. niaowangensis Q.H. Chen) Under Cold Stress.
Not available
S-EPMC8309439 | biostudies-literature
UnknownMultimetric structural covariance in first-episode major depressive disorder: a graph theoretical analysis.
Not available
S-EPMC9074807 | biostudies-literature
UnknownTop Priorities for Cerebroprotective Studies-A Paradigm Shift: Report From STAIR XI.
Not available
S-EPMC8384700 | biostudies-literature
TranscriptomicsEthosuximide ameliorates neurodegenerative disease phenotypes by modulating DAF-16/FOXO target gene expression
Transcriptional profiling of C. elegans strains grown in the presence and absence of ethosuximide. Two mutant alleles of dnj-14 (tm3223 and ok237) and two wild type control strains (N2 and CZ1200) were analysed. dnj-14 is the worm orthologue of the human DNAJC5 gene, mutations in which cause the neu...
ORGANISM(S): Caenorhabditis elegans 
2015-10-02 | E-MTAB-3919 | biostudies-arrayexpress
UnknownIntraoperative thromboelastography-guided transfusion in a patient with factor XI deficiency: A case report.
Not available
S-EPMC8727276 | biostudies-literature
UnknownMolecular characterization and phylogenetic analyses of the mitogenome of Wan-Xi white goose, a native goose breed in China.
Not available
S-EPMC12070641 | biostudies-literature
ProteomicsEffects of arbuscular mycorrhizal fungi on Pteris cretica L var. nervosa fronds antimony enrichment, morphology and proteome changes during antimony phytoremediation
Pteris cretica L var. nervosa is one of the dominent fern species at antimony mining area where arbuscular mycorrhizal fungi can be found as a symbiosis. The effect of AMF on fern exposed to long-term excessive Sb was pooly understood. The project applied this fern co-cultivting with or withour AMF ...
ORGANISM(S): Pteris cretica var. nervosa 
2024-01-19 | PXD012678 | Pride
Arbuscular mycorrhizal fungi Antimony phytoremediation Pteris cretica l var. nervosa Long-term exposure Fronds proteomic identification 
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