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ProteomicsHigh-throughput lysis and proteolytic digestion of tissues using pressure cycling technology for proteomics
we describe a protocol for pressure cycling technology (PCT) assisted tissue sample preparation for high-throughput proteomics
ORGANISM(S): Homo Sapiens Mus Musculus 
2021-12-24 | PXD030645 |
ProteomicsResistance prediction in HGSOC with NACT using data-independent acquisition proteomics and an ovarian tissue-specific spectral library
We firstly built a high-quality ovarian tissue-specific spectral library containing 130,735 peptides and 10,696 proteins on Orbitrap instruments. Compared to a published pan-human spectral library (DPHL), this spectral library provides 10% more ovary-specific and 3% more ovary-enriched proteins. Thi...
ORGANISM(S): Homo Sapiens 
2023-01-02 | PXD039160 |
ProteomicsCircadian proteome atlas of wild-type and Per1-/-/Per2-/- mice models across eight organs
a circadian proteome atlas of eight organs, namely suprachiasmatic nucleus (SCN), hypothalamus (HPOA), liver (LIV), gall bladder (GBD), brown adipose tissue (BAT), kidney (KDN), heart (HEA) and muscle (MUS), from wild-type (WT) and Per1-/-/Per2-/- (DKO) mice housed under constant darkness and ad lib...
ORGANISM(S): Mus Musculus 
2023-11-28 | PXD047352 |
ProteomicsProteome data from an external validation cohort using MRM-MS targeted proteomics assay
These are raw mass spectrometry files obtained by MRM from the external validation cohort, used to validate findings from the Guangzhou Nutrition and Health Study.
ORGANISM(S): Homo Sapiens 
2024-10-18 | PXD056935 |
ProteomicsCirculating proteome profiling of Guangzhou Nutrition and Health Study
Guangzhou Nutrition and Health Study was a community-based cohort study in Guangzhou, China.
ORGANISM(S): Homo Sapiens 
2023-01-03 | PXD039231 |
ProteomicsCirculating proteome profiling of Westlake Precision Birth Cohort
Westlake Precision Birth Cohort (WEBIRTH) consists of gestational women living in Hangzhou, China.
ORGANISM(S): Homo Sapiens 
2022-11-22 | PXD038253 |
ProteomicsGNHS proteome SWATH data datatat
Here, we explored the feasibility to use a protein-based machine learning model for risk prediction of MetS in a prospective cohort.
ORGANISM(S): Homo Sapiens 
2023-03-11 | PXD039236 |
ProteomicsProteomics Landscape of Diverse Serological Patterns in COVID-19
Serological test is a powerful tool to help clinicians assess the patients’ status during COVID-19 treatment. Highly diverse serological outcomes as exemplified by the negative or overly high IgG and IgM expressions are frequently reported but never elucidated interpreted with molecular insights. We...
ORGANISM(S): Homo Sapiens 
2023-01-27 | PXD039722 |
ProteomicsDPHL v2: An updated and comprehensive DIA pan-human assay library for quantifying more than 14,000 proteins
we generated DPHL v2 from 1608 DDA-MS data acquired using Orbitrap mass spectrometers. The data included 586 DDA-MS newly acquired from 17 tissue types, while 1022 files were derived from DPHL v1. DPHL v2 thus comprises data from 24 sample types, including several cancer types . We generated four va...
ORGANISM(S): Homo Sapiens 
2023-01-18 | PXD039313 |
ProteomicsSpatial distribution of the proteome in human body and cancers
The ddaPASEF and diaPASEF data were acquired from over 60 types of human specimens. Based on these, the consensus spectral libraries were generated and used in subsequent DIA analysis to demonstrate a quantitative human proteome map and discover potential cancer biomarkers.
ORGANISM(S): Homo Sapiens 
2026-04-15 | PXD077178 |
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