Zhang Zhen Z - OmicsDI

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Unknown (445)
Proteomics (126)
Transcriptomics (18)
Metabolomics (12)
Genomics (9)
Other (1)

Organisms

Homo sapiens (58)
Andropogon gerardi (29)
Bacteria (29)
Canis lupus familiaris (29)
Clostridium perfringens (29)
Cnidaria (29)
Mus musculus (23)
Arabidopsis thaliana (5)
Escherichia coli (4)
Aeromonas hydrophila subsp. hydrophila ATCC 7966 (3)
Nicotiana benthamiana (3)
Oryza sativa (2)
Rattus rattus (2)
Lonicera japonica (1)
Clostridium botulinum A str. ATCC 3502 (1)
Prunus persica (1)
Zea mays (1)
Rattus norvegicus (1)
Cervus nippon (1)
Drosophila melanogaster (1)
Escherichia coli BL21(DE3) (1)
Glaesserella parasuis (1)
Helicoverpa armigera nucleopolyhedrovirus G4 (1)
Medicago sativa (1)
Medicago truncatula (1)
Mus (1)
Mus sp. (1)
Saccharomyces cerevisiae (1)
Solanum tuberosum (1)
Staphylococcus aureus (1)

Repository

iProX (71)
pride (29)
biostudies-arrayexpress (20)
PeptideAtlas (13)
MetaboLights (12)
MassIVE (10)
EGA (8)
PAXDB (3)
GPMDB (1)

Tissue

Plasma Non-glyco (11)
Cell culture (8)
Male Reproductive System (2)
Blood serum (2)
Leaf (2)
Whole body (2)
Blood plasma (1)
Brain (1)
Early embryonic cell (1)
Endosperm (1)
Extracellular exosome assembly (1)
HeLa cell (1)
Oocyte (1)
Photosynthetic cell (1)
Plant cell (1)
Stem cell (1)
Stomach (1)
Testis (1)
Trophoblast (1)
Venom apparatus (1)

Disease

Disease free (2)
Not Available (1)
Diabetes mellitus (1)
Stomach cancer (1)

Technology Type

Mass Spectrometry (29)
Shotgun proteomics (20)
Mass spectrometry (9)
Affinity purification coupled with mass spectrometry proteomics (6)
Mass spectrometry assay (3)
Illumina HiSeq 2000, ILLUMINA (2)
All-ion fragmentation (2)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
SRM/MRM (1)

Instrument Platform

LTQ Orbitrap Velos (15)
Liquid Chromatography MS - negative - reverse phase (5)
Liquid Chromatography MS - positive - reverse phase (5)
Orbitrap Fusion Lumos (3)
Q Exactive (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Illumina HiSeq 1000 (1)
Instrument (1)
LTQ Orbitrap (1)
LTQ Orbitrap Elite (1)
Q Exactive HF (1)
TripleTOF 6600 (1)
MS Imaging - negative (1)
MS Imaging - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2022 (20)
2015 (18)
2024 (18)
2023 (16)
2021 (14)
2025 (12)
2020 (12)
2019 (12)
2018 (11)
2014 (6)
2026 (6)
2010 (4)
2016 (2)
2008 (2)
2017 (2)
2013 (1)
2012 (1)
2007 (1)

UNIPROT ID/AC

89462.XP_006039626.1 (2)
89462.XP_006039668.1 (2)
89462.XP_006039692.1 (2)
89462.XP_006039696.1 (2)
89462.XP_006039697.1 (2)
89462.XP_006039712.1 (2)
89462.XP_006039721.1 (2)
89462.XP_006039763.1 (2)
89462.XP_006039815.1 (2)
89462.XP_006039846.1 (2)
89462.XP_006039847.1 (2)
89462.XP_006039864.1 (2)
89462.XP_006039919.1 (2)
89462.XP_006039938.1 (2)
89462.XP_006039950.1 (2)
89462.XP_006039955.1 (2)
89462.XP_006039984.1 (2)
89462.XP_006039985.1 (2)
89462.XP_006039986.1 (2)
89462.XP_006040008.1 (2)
89462.XP_006040012.1 (2)
89462.XP_006040013.1 (2)
89462.XP_006040026.1 (2)
89462.XP_006040037.1 (2)
89462.XP_006040043.1 (2)
89462.XP_006040056.1 (2)
89462.XP_006040057.1 (2)
89462.XP_006040062.1 (2)
89462.XP_006040063.1 (2)
89462.XP_006040065.1 (2)

ENSEMBL ID

ENSG00000170477 (13)
ENSG00000147251 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17203 (5)
CHEBI:16027 (5)
CHEBI:27849 (4)
CHEBI:102265 (4)
CHEBI:4853 (4)
CHEBI:16691 (4)
CHEBI:28931 (4)
CHEBI:1387 (4)
CHEBI:1015 (4)
CHEBI:17890 (4)
CHEBI:34687 (4)
CHEBI:28487 (4)
CHEBI:17202 (4)
CHEBI:9300 (4)
CHEBI:10136 (4)
CHEBI:16708 (4)
CHEBI:16119 (4)
CHEBI:34698 (4)
CHEBI:29069 (4)
CHEBI:35026 (4)
CHEBI:35697 (4)
CHEBI:17012 (4)
CHEBI:17859 (4)
CHEBI:18211 (4)
CHEBI:55328 (4)
CHEBI:48131 (4)
CHEBI:17385 (4)
CHEBI:16704 (4)
CHEBI:48153 (4)
CHEBI:17750 (4)

Metabolite Name

Pentadecanoic acid (5)
Uridine (5)
Hypoxanthine (5)
D-Xylose (4)
N-Acetyl-D-glucosamine (4)
Uracil (4)
Protocatechuic acid (4)
N-Acetylneuraminic acid (4)
Stearic acid (4)
Pyruvic acid (4)
Arachidonic acid (4)
Citric acid (4)
Glyceric acid (4)
Suberic acid (4)
Palmitic acid (4)
Glutaric acid (4)
Dodecanedioic acid (4)
Citramalic acid (4)
Adenine (4)
D-Fructose 1-phosphate (3)
N-Formyl-L-aspartate (3)
Fenoldopam (3)
Cholesterol sulfate (3)
Docosapentaenoic acid (22n-3) (3)
Alpha-Solanine (3)
Piceatannol (3)
Sinapic acid (3)
Sinigrin (3)
Agnuside (3)
Galactonic acid (3)

Study type

Transcription profiling by array (6)
RNA-seq of non coding RNA (6)
ChIP-chip by tiling array (4)
Other (1)
ChIP-seq (1)
RNA-seq of total RNA (1)

Release Date

2025 (77)
2023 (71)
2022 (70)
2024 (61)
2021 (48)
2020 (33)
2019 (18)
2014 (16)
2018 (16)
2016 (10)
2015 (10)
2017 (10)
2026 (7)
2013 (4)
2010 (4)
2011 (4)
2012 (2)
2008 (2)
2007 (1)
2009 (1)

Lab affiliation

Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA (4)
State Key Laboratory of Genetic Engineering, Department of Biochemistry and Biophysics, School of Life Sciences, Fudan University, Shanghai 200438, China (3)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200438, China (3)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA (2)
BGI-shenzhen (1)
College of Animal Science and Technology, Key Laboratory of Animal Nutrition and Feed Science of Jilin Province, Key Laboratory of Animal Production Product Quality and Security Ministry of Education, Jilin Agricultural University, China (1)
College of Biology, Hunan University, China (1)
College of Life Science, Capital Normal University, 100048 Beijing, China (1)
College of Life Science, Capital Normal University, Beijing 100048, China (1)
Fujian Provincial Key Laboratory of Insect Ecology, Department of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou 350002, Fujian, China (1)
InnoHK Centre for Translational Stem Cell Biology, The University of Hong Kong (1)
Institute of Vascular Medicine, and Li Ka Shing Institute of Health Sciences, Chinese University of Hong Kong (1)
Key Laboratory of Genetics and Biotechnology, College of Life Science, Capital Normal University, XisanhuanBeilu No. 105, 100048 Beijing, P. R. of China. (1)
National Center for Protein Sciences (The PHOENIX center, Beijing) (1)
Reproductive Medicine Center, The Third Afliated Hospital of ShenZhen University (1)
Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine， 33 Life Science Park Road, Beijing 102206, P.R. China. Tel 0086-10-80727777 EXT 1314 (1)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai, China (1)
State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China (1)
Sun yat-sen university (1)
Yangzhou University (1)
Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, Shandong, China (1)

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Ficusmotuoensis (Moraceae), a new species from southwest China.

Not available

S-EPMC9848943 | biostudies-literature

Synechocystis sp. PCC 6803(iron and/or copper starvation)-LC MS/MS

The protein abundance of Synechocystis in response to the given copper-iron combination was examined, then followed by comparative proteomic analyses to reveal the proteins associated with copper and iron stress. These data would provide a theoretical basis for understanding the relationship between...

ORGANISM(S): Synechocystis sp. PCC 6803

2021-04-26 | PXD024873 | Pride

Discover the Maze-like Pathway for Glabridin Biosynthesis

Glabridin is a bioactive isoflavan predominantly produced in Glycyrrhiza species and is of significant pharmacological and industrial interest. However, its biosynthetic pathway remains incompletely resolved due to the involvement of multiple branching reactions and poorly characterized...

2026-01-16 | MTBLS13519 | MetaboLights

Expression data from a Tbx1 gene allelic series

This study was aimed at identifying Tbx1 dosage-dependent genes in vivo, so we performed a transcriptome analysis of Tbx1 mutants with nine different genotypes corresponding to different Tbx1 mRNA dosages. RNA isolated from whole E9.5 embryos with 9 different genotypes was hibridized to Affymetrix G...

ORGANISM(S): Mus musculus

2012-04-03 | E-GEOD-33064 | biostudies-arrayexpress

Interleukin-18 genetic polymorphisms contribute differentially to the susceptibility to Crohn's disease.

Not available

S-EPMC4515852 | biostudies-literature

Transcription profiling of Arabidopsis pollen germination and tube growth

Pollen germination, along with pollen tube growth, is an essential process for the reproduction of flowering plants. The germinating pollen with tip-growth characteristics provides an ideal model system for the study of cell growth and morphogenesis. As an essential step towards a detailed underst...

ORGANISM(S): Arabidopsis thaliana

2008-10-25 | E-GEOD-6696 | biostudies-arrayexpress

Emerging mechanisms and promising approaches in pancreatic cancer metabolism.

Pancreatic cancer is an aggressive cancer with a poor prognosis. Metabolic abnormalities are one of the hallmarks of pancreatic cancer, and pancreatic cancer cells can adapt to biosynthesis, energy intake and redox needs through metabolic reprogramming to tolerate nutrient deficiency and hypoxic ...

2025-03-26 | MTBLS12204 | MetaboLights

Emergence of OXA-232 Carbapenemase-Producing Klebsiella pneumoniae That Carries a pLVPK-Like Virulence Plasmid among Elderly Patients in China.

Not available

S-EPMC6395905 | biostudies-literature

Application of machine learning algorithm in predicting distant metastasis of T1 gastric cancer.

Not available

S-EPMC10082185 | biostudies-literature

A multiplex fragment ion-based method for accurate proteome quantification

We developed a multiplex pseudo-isobaric dimethyl labeling (m-pIDL) method for proteome quantification to extend the capacity of the fragment ion-based method to 6-plex by one-step dimethyl labeling with several millidalton and dalton mass differences between precursor ions and enlarging the isolati...

ORGANISM(S): Homo Sapiens Escherichia Coli

2019-01-22 | PXD012457 |

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612 Results

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Organisms

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