Zheng Shu S - OmicsDI

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Unknown (524)
Proteomics (27)
Genomics (4)
Transcriptomics (2)
Genomic (1)
Metabolomics (1)

Organisms

Homo sapiens (14)
Andropogon gerardi (6)
Bacteria (6)
Borrelia (6)
Botrytis cinerea (6)
Canis lupus familiaris (6)
Clostridium perfringens (6)
Cnidaria (6)
Cricetulus griseus (6)
Eukaryota (6)
Fasciola (6)
Hepatitis B virus (6)
Human betaherpesvirus 5 (6)
Japanese encephalitis virus group (6)
Miscanthus x giganteus (6)
Mycobacterium tuberculosis (6)
Orthoflavivirus (6)
Panicum virgatum (6)
Platyhelminthes (6)
Pseudomonas aeruginosa AES-1R (6)
Rickettsia (6)
Escherichia coli (5)
Mycobacterium tuberculosis H37Rv_2009 (2)
Paeonia ostii (1)
Chlorocebus sabaeus (1)
Diaphorina citri (1)
Mus musculus (1)
Oryctolagus cuniculus (1)
Propsilocerus akamusi (1)
Severe acute respiratory syndrome coronavirus 2 (1)

Repository

iProX (21)
pride (6)
EGA (4)
biostudies-arrayexpress (2)
dbGaP (1)
MetaboLights (1)

Tissue

B cell (1)
Burkitt lymphoma cell (1)
Cell culture (1)
Embryo (1)
Fibroblast (1)
Liver (1)
Lung (1)
Umbilical vein endothelium (1)

Technology Type

Mass Spectrometry (6)
Bottom-up proteomics (4)
Mass spectrometry (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Shotgun proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2022 (6)
2026 (3)
2023 (2)
2021 (2)
2020 (2)
2017 (1)
2014 (1)
2018 (1)
2025 (1)

CHEBI ID

CHEBI:169656 (1)
CHEBI:169654 (1)
CHEBI:89842 (1)
CHEBI:169648 (1)
CHEBI:169646 (1)
CHEBI:169642 (1)
CHEBI:169638 (1)
CHEBI:169636 (1)
CHEBI:169634 (1)
CHEBI:169632 (1)
CHEBI:169628 (1)
CHEBI:81818 (1)
CHEBI:169624 (1)
CHEBI:169622 (1)
CHEBI:169616 (1)
CHEBI:169614 (1)
CHEBI:169610 (1)
CHEBI:169608 (1)
CHEBI:169602 (1)
CHEBI:169599 (1)
CHEBI:169595 (1)
CHEBI:8717 (1)
CHEBI:169591 (1)
CHEBI:169589 (1)
CHEBI:169587 (1)
CHEBI:169585 (1)
CHEBI:169583 (1)
CHEBI:169581 (1)
CHEBI:169577 (1)
CHEBI:66996 (1)

Metabolite Name

3-bromo-2E-nonenoic acid (1)
Quercetagetin 4'-methyl ether 7-(6-(E)-caffeylglucoside) (1)
Cyanidin 3-(6''-p-coumarylglucoside)-5-4''',6'''-dimalonylglucoside) (1)
PC(O-20:0/19:0) (1)
Punaglandin 7 (1)
1-O-myristoyl-Cer(d18:1/16:0) (1)
8-Hydroxydesmethylclomipramine (1)
PI(14:1(9Z)/18:2(9Z,12Z)) (1)
3-(4-hydroxy-3-methoxyphenyl)-11,19-bis(4-hydroxyphenyl)-4,12,20-trioxaheptacyclo[16.6.1.1?,?.1??,??.0??,??.0?,??.0??,??]heptacosa-1(25),5,7,9(27),13,15,17(26),21,23-nonaene-7,15,23-triol (1)
Citbismine E (1)
PE-GlcGlcDG(P-14:0/16:1(9Z)) (1)
Delphinidin 3-robinobioside-5-(6-(E)-p-coumarylglucoside) (1)
Ortho-hydroxyatorvastatin (1)
Cer(t20:0/26:0(2OH)) (1)
{4-[5,7-dihydroxy-8-(3-methylbut-2-en-1-yl)-4-oxo-3,4-dihydro-2H-1-benzopyran-3-yl]-2-hydroxy-6-(3-methylbut-2-en-1-yl)phenyl}oxidanesulfonic acid (1)
Manumycin (1)
3-Geranyl-4,2',4',6'-tetrahydroxy-5-prenyldihydrochalcone (1)
Calabricoside B (1)
3-hydroxy-2-[3-methoxy-4-(sulfooxy)phenyl]-7-(sulfinooxy)-3,4-dihydro-2H-1-benzopyran-5-olate (1)
Orientin 2''-O-xyloside-6''-ferulate (1)
N-(2-methyl-3-chloro-4-hydroxyphenyl)anthranilic acid (1)
Glucoscilliroside (1)
PI(O-16:0/15:0) (1)
6-{[2-(4-{[3-({3,4-dihydroxy-4-[(1H-indole-3-carbonyloxy)methyl]oxolan-2-yl}oxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phenyl)-4-oxo-3,4-dihydro-2H-1-benzopyran-7-yl]oxy}-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
{6,7,8,11,12,13,21,22-octahydroxy-3,16-dioxo-2,17,20-trioxatetracyclo[17.3.1.0?,?.0??,??]tricosa-4,6,8,10,12,14-hexaen-23-yl}oxidanesulfonic acid (1)
Leucadenone C (1)
{6,7,8,11,12,13,21,23-octahydroxy-3,16-dioxo-2,17,20-trioxatetracyclo[17.3.1.0?,?.0??,??]tricosa-4,6,8,10,12,14-hexaen-22-yl}oxidanesulfonic acid (1)
1alpha,25-dihydroxy-(26,26)-(27,27)-diethanovitamin D3 / 1alpha,25-dihydroxy-(26,26)-(27,27)-diethanocholecalciferol (1)
Petunidin 3-glucoside-5-(6''-acetylglucoside) (1)
[4-({[2,3-dihydroxy-6-(hydroxymethyl)-5-(3,4,5-trihydroxybenzoyloxy)oxan-4-yl]oxy}carbonyl)-2,6-dihydroxyphenyl]oxidanesulfonic acid (1)

Study type

Transcription profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2021 (57)
2025 (56)
2022 (46)
2024 (45)
2016 (42)
2023 (39)
2020 (39)
2015 (34)
2019 (33)
2014 (25)
2018 (23)
2013 (23)
2017 (22)
2012 (16)
2011 (11)
2010 (5)
2009 (3)
2008 (3)
2026 (2)
2007 (2)

Lab affiliation

Department of Pathology, The First Affiliated Hospital, Sun Yat-sen University (1)
Key Laboratory of Imaging Diagnosis and Minimally Invasive Intervention Research, Fifth Affiliated Hospital of Wenzhou Medical University, Lishui 323000, China (1)
Meng Lab, Department of Basic Research, Guangzhou National Laboratory No.9, XingDaoHuanBei Road, Guangzhou International Bio-island, Haizhu District Guangzhou, Guangdong, 510005, China (1)
Meng Lab, Department of Basic Research, Guangzhou National Laboratory, No.9, XingDaoHuanBei Road, Guangzhou International Bio-island, Haizhu District Guangzhou, Guangdong, 510005, China (1)
The Second Affiliated Hospital of Zhejiang University, Medicine Cancer Institute (1)
University of Southern California (1)

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Mouse lung proteomics and S-nitrosoproteomics using LC-MS/MS

Idiopathic pulmonary fibrosis (IPF) is a progressive lung disease characterized by excessive extracellular matrix deposition and impaired tissue repair. S-nitrosoglutathione reductase (GSNOR, encoded by ADH5) is a key enzyme that regulates protein S-nitrosylation by metabolizing S-nitrosoglutathione...

ORGANISM(S): Mus musculus (Mouse)

2026-09-14 | PXD061250 | Pride

Bidirectional two-sample Mendelian randomization analysis identifies protein C rather than protein S or antithrombin-III as associated with deep venous thrombosis.

Not available

S-EPMC11969515 | biostudies-literature

A distal super-enhancer activates oncogenic ETS2 via recruiting MECOM in inflammatory bowel disease and colorectal cancer.

Not available

S-EPMC9822945 | biostudies-literature

Mandibular asymmetry: a three-dimensional quantification of bilateral condyles.

Not available

S-EPMC3878129 | biostudies-literature

Fibrinogen chain positive circulating exosomes are a colorectal cancer potential biomarker

Exosomes are small vesicles contain cellular nucleic acids, proteins, lipids and other substances secreted by living cells. The special structure of exosomes makes it possible to protect the inside contents exist in blood stably. Recent researches showed that exosomes are blame for tumor metastatic ...

ORGANISM(S): Homo sapiens (Human)

2020-05-26 | PXD009490 | Pride

Colorectal cancer Exosome Protein mass spectrometry，biomarker

Isothiocyanate exposure, glutathione S-transferase polymorphisms, and colorectal cancer risk.

Not available

S-EPMC2824157 | biostudies-literature

Molecular phylogeny reveals cryptic diversity in Sibynophis from China (Serpentes: Sibynophiidae).

Not available

S-EPMC10375455 | biostudies-literature

microRNA-15b-5p encapsulated by M2 macrophage-derived extracellular vesicles promotes gastric cancer metastasis by targeting BRMS1 and suppressing DAPK1 transcription.

Not available

S-EPMC9027839 | biostudies-literature