Zhi X X - OmicsDI

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Unknown (1248)
Proteomics (103)
Transcriptomics (46)
Metabolomics (21)
Genomics (11)
Multiomics (4)
Other (3)

Organisms

Homo sapiens (63)
Mus musculus (30)
Arabidopsis thaliana (5)
Rattus norvegicus (4)
Oryza sativa (4)
Beauveria bassiana CGMCC 7.34 (4)
Bombyx mori (2)
synthetic construct (2)
Citrus sinensis (2)
Saccharomyces cerevisiae (2)
Populus tremula x Populus alba (2)
Solanum lycopersicum (2)
Aspergillus flavus (1)
Oryza sativa Indica Group (1)
Schizosaccharomyces pombe (1)
Oryza sativa Japonica Group (1)
Gallus gallus (1)
Anastatus japonicus (1)
Mesocomys (1)
Mus (1)
Mycobacteroides abscessus ATCC 19977 (1)
Oryctolagus cuniculus (1)
Pseudomonas aeruginosa (1)
Pyrus x bretschneideri (1)
Skeletonema dohrnii (1)
Zea mays (1)
Labeo rohita (1)
Broussonetia papyrifera (1)
Enterococcus faecalis (1)
Leptopilina heterotoma (1)

Repository

biostudies-arrayexpress (57)
iProX (44)
pride (35)
MetaboLights (19)
PeptideAtlas (13)
MassIVE (7)
GNPS (2)
GPMDB (2)
PAXDB (2)
EGA (1)
NODE (1)
PanoramaPublic (1)

Tissue

Cell culture (8)
Fungal asexual spore (4)
Leaf (3)
Liver (3)
Male Reproductive System (2)
Blastopore (2)
Conidium (2)
Epithelial cell (2)
Plant cell (2)
Whole body (2)
Blood platelet (1)
Blood serum (1)
Brain (1)
Cell suspension culture (1)
Epithelial cell of lung (1)
Lung (1)
Lymphocyte (1)
Nasopharyngeal epithelial cell (1)
Retina (1)
Secretion (1)
Vascular tissue (1)
Vitreous humor (1)

Disease

Not Available (2)
Normal (1)
Cervix carcinoma (1)
Lung cancer (1)
Lymphoma (1)
Metabolic dysfunction-associated steatotic liver disease (1)
Nasopharynx carcinoma (1)
Non-small cell lung carcinoma (1)
Proliferative diabetic retinopathy (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (35)
Shotgun proteomics (22)
Mass spectrometry (16)
Data-dependent acquisition (5)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (2)
SWATH MS (2)
NMR spectroscopy (1)
All-ion fragmentation (1)
Bottom-up proteomics (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

LTQ Orbitrap Velos (7)
Liquid Chromatography MS - negative - reverse phase (7)
Liquid Chromatography MS - positive - reverse phase (7)
LTQ Orbitrap XL (7)
Illumina HiSeq 2000 (3)
Q Exactive (3)
LTQ Orbitrap (3)
Instrument (2)
LTQ Orbitrap Elite (2)
Orbitrap Fusion (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina NovaSeq 6000 (1)
6540 Q-TOF LC/MS (Agilent) (1)
Bruker (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - negative – rp (1)
Liquid Chromatography MS - positive – rp (1)
Ultra-High Performance Liquid Chromatography - Time Of Flight MS - Negative (UPLC-TOF MS(Negative)) (Waters) (1)
Ultra-High Performance Liquid Chromatography-Q Exactive Plus MS&MS/MS-Negative(UHPLC-MS&MS/MS(Negative))(Thermo Scientific) (1)

Publication Date

2022 (22)
2013 (21)
2023 (17)
2024 (15)
2025 (14)
2014 (12)
2016 (11)
2015 (9)
2012 (9)
2021 (9)
2026 (8)
2019 (8)
2011 (6)
2017 (5)
2010 (4)
2018 (3)
2009 (2)
2008 (2)
2020 (2)
2007 (1)

UNIPROT ID/AC

1FEH1_WHEAT (2)
4565.Traes_1AL_3CF82DD08.2 (2)
4565.Traes_1AL_3FDB6FDB4.1 (2)
4565.Traes_1AL_44FB362A9.2 (2)
4565.Traes_1AL_4E621A250.2 (2)
4565.Traes_1AL_51D597B92.1 (2)
4565.Traes_1AL_52E56C8D3.1 (2)
4565.Traes_1AL_53F3380AF.1 (2)
4565.Traes_1AL_5E2C30B46.1 (2)
4565.Traes_1AL_6B64D0E80.1 (2)
4565.Traes_1AL_72202D9DF.1 (2)
4565.Traes_1AL_738358449.1 (2)
4565.Traes_1AL_78CB13657.2 (2)
4565.Traes_1AL_7B509569F.1 (2)
4565.Traes_1AL_7CF571E9F.1 (2)
4565.Traes_1AL_7D6DC73FC.2 (2)
4565.Traes_1AL_9C2D7A0A6.1 (2)
4565.Traes_1AL_9EFC68149.1 (2)
4565.Traes_1AL_A47D32D30.1 (2)
4565.Traes_1AL_A69755144.1 (2)
4565.Traes_1AL_B15921488.1 (2)
4565.Traes_1AL_BAAF4391C.1 (2)
4565.Traes_1AL_BAB3D977B.1 (2)
4565.Traes_1AL_D06A380E9.2 (2)
4565.Traes_1AL_D39C4F23A.2 (2)
4565.Traes_1AL_D789B5634.1 (2)
4565.Traes_1AL_D8B97BD8D.1 (2)
4565.Traes_1AL_D8FE82B94.1 (2)
4565.Traes_1AL_E07235CF1.1 (2)
4565.Traes_1AL_EEB8BBB6B.1 (2)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000247315 (2)
ENSG00000147251 (1)
ENSG00000204131 (1)

CHEBI ID

CHEBI:15741 (6)
CHEBI:16015 (6)
CHEBI:16196 (6)
CHEBI:16335 (6)
CHEBI:16467 (6)
CHEBI:16704 (6)
CHEBI:17895 (6)
CHEBI:18019 (6)
CHEBI:30746 (6)
CHEBI:116314 (5)
CHEBI:15318 (5)
CHEBI:16040 (5)
CHEBI:16750 (5)
CHEBI:16828 (5)
CHEBI:16865 (5)
CHEBI:17196 (5)
CHEBI:17203 (5)
CHEBI:17368 (5)
CHEBI:17489 (5)
CHEBI:17509 (5)
CHEBI:17521 (5)
CHEBI:30769 (5)
CHEBI:35697 (5)
CHEBI:41865 (5)
CHEBI:64032 (5)
CHEBI:143245 (4)
CHEBI:15765 (4)
CHEBI:15891 (4)
CHEBI:15929 (4)
CHEBI:15971 (4)

Metabolite Name

Uridine (7)
Adenine (4)
Cytosine (4)
Guanine (4)
Guanosine (4)
Hypoxanthine (4)
L-Arginine (4)
L-Asparagine (4)
L-Histidine (4)
L-Ornithine (4)
L-Proline (4)
Niacinamide (4)
Riboflavin (4)
Serotonin (4)
Xanthine (4)
2'-deoxyinosine (3)
Acetylcarnitine (3)
Adenosine (3)
Asperuloside (3)
Benzaldehyde (3)
Benzoic Acid (3)
Betaine (3)
Creatine (3)
Dodecanedioic acid (3)
Ectoine (3)
Elemicin (3)
Glucosamine (3)
Glutathione, oxidized (3)
Glycerophosphocholine (3)
Histamine (3)

Study type

Transcription profiling by array (26)
RNA-seq of coding RNA (9)
ChIP-seq (7)
Comparative genomic hybridization by array (6)
RNA-seq of non coding RNA (3)
Proteomic profiling by array (2)
Methylation profiling by high throughput sequencing (2)
Genotyping by array (1)
Methylation profiling by array (1)

Release Date

2025 (181)
2022 (164)
2023 (152)
2024 (130)
2021 (118)
2020 (104)
2018 (71)
2016 (65)
2019 (61)
2017 (56)
2015 (42)
2013 (33)
2014 (32)
2012 (24)
2026 (23)
2011 (21)
2010 (12)
2008 (6)
2009 (4)
2007 (2)
2006 (2)
2004 (2)

Lab affiliation

Biotechnology Research Center, No.2 Tiansheng Road, BeiBei District, Chongqing, 400715,P.R.China (4)
1. Department of Biochemistry and Molecular Cell Biology, State Key Laboratory of Oncogenes and Related Genes, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine. (2)
Xiamen University (2)
lanzhou university (2)
Affiliated Traditional Chinese Medicine Hospital of Southwest Medical University, China. (1)
Analytical Research Center for Organic and Biological Molecules, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zu Chong Zhi Road, Shanghai 201203, China (1)
Department of Infectious Diseases and the Key Lab of Endogenous Infection, Shenzhen Nanshan People's Hospital and The 6th Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen 518052, China (1)
Department of Ophthalmology, Shanghai General Hospital,Shanghai Jiao Tong University School of Medicine, National Clinical Research Center for Eye Diseases, Shanghai Key Laboratory of Ocular Fundus Diseases, Shanghai Engineering Center for Visual Science and Photomedicine, Shanghai engineering center for precise diagnosis and treatment of eye diseases (1)
Department of Pathophysiology, Key Laboratory of Ministry of Education for Neurological Disorders, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Pathophysiology, School of Basic Medicine, Key Laboratory of Ministry of Education of China for Neurological Disorders, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Plant Biology, Carnegie Instition for Science (1)
Institute for Systems Biology (1)
Institute of Insect Sciences, College of Agriculture and Biotechnology, Zhejiang University, China (1)
Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops, Key Laboratory of Plant Functional Genomics of the Ministry of Education, Yangzhou University, Yangzhou 225009,China (1)
Key Laboratory of Environmental Medicine Engineering, Ministry of Education, School of Public Health, Southeast University, Nanjing, China. (1)
Key Laboratory of Plant Resources, Institute of Botany, the Chinese Academy of Sciences, Beijing (1)
Laboratory of Protein Structure and Function, Institute of Medicine and Pharmacy, Qiqihar Medical University, Qiqihar, Heilongjiang 161006, China. (1)
Nanjing University, Nanjing 210023, China (1)
Nankai University, China (1)
Pediatric Infectious Diseases Molecular Genetics and Microbiology Stony Brook University Life Sciences Building, Rm. 158 Stony Brook, NY 11794-5222 U.S.A. (1)
Qiqihar Medical University (1)
Research Center of Carcinogenesis and Targeted Therapy, Xiangya Hospital, Central South University, Changsha, Hunan 410008, China (1)
Shenzhen Center for Disease Control and Prevention (1)
ShuGuang Hospital Affiliated to Shanghai University of Chinese Traditional Medicine (1)
State Key Laboratory of Marine Environmental Science / College of the Environment and Ecology, Xiamen University, China (1)
State Key Laboratory of Microbial Metabolism, School of Life Science and Biotechnology, Shanghai Jiao Tong University (1)
State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou, China (1)
State key laboratory of crop genetics and germplasm enhancement, college of agriculture, Nanjing Agricultural University, China (1)
Vascular Biology Center, Augusta University (1)

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Transcription profiling of Populus x canescens fine roots inoculated with Paxillus involutus in response to salt stress

Populus x canescens was inoculated with Paxillus involutus and grown in a climate chamber for 13 weeks. Afterwards, plants were salt stressed for 18 additional days with 150 mM NaCl in the nutrient solution. This resulted in 4 different treatments: no mycorrhiza
control (NC), mycorrhiza/control (...

ORGANISM(S): Populus tremula x Populus alba

2009-09-16 | E-MEXP-1874 | biostudies-arrayexpress

Folic acid-conjugated silica capped gold nanoclusters for targeted fluorescence/X-ray computed tomography imaging.

Not available

S-EPMC3669628 | biostudies-literature

Synergistic impact of Gui Zhi Shao Yao Zhi Mu Decoction and leflunomide on gut microbiota in rheumatoid arthritis: insights from 16S rDNA sequencing.

Not available

S-EPMC10918140 | biostudies-literature

Organic phosphorescent nanoscintillator for low-dose X-ray-induced photodynamic therapy.

Not available

S-EPMC9428140 | biostudies-literature

Characterization of primordial germ cells from EG&K stage X chicken embryos.