Proteomics

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Ethynyl-1,2,3-triazolyl-phosphinate based electrophiles for cysteine labelling


ABSTRACT: Herein we report the density functional theory (DFT) guided discovery of ethynyl-triazolyl-phosphinates (PT) as a new class of electrophilic warhead for cysteine selective bioconjugation. Using DFT-calculations, we found that both the electron withdrawing character as well as the π-acidity of the P-bound triazole significantly contribute to its enhanced reactivity towards thiols. We developed a straightforward synthetic route starting from readily available organic azides and diethynyl phosphinates using CuI-catalysed azide alkyne cycloaddition in aqueous buffer to access a variety of functional electrophiles. These reagents were used to obtain fluorescent peptide-conjugates for receptor labelling on live cells and in the generation of stable and biologically active antibody-drug-conjugates. Moreover, we were able to incorporate PT-electrophiles into azide-containing proteins under native conditions and demonstrate their potential in protein-protein conjugation. Finally, we showcase the excellent cysteine selectivity of this new class of electrophile in mass spectrometry based, proteome-wide cysteine profiling.

INSTRUMENT(S): Orbitrap Fusion

ORGANISM(S): Homo Sapiens (human)

SUBMITTER: Christian Stieger  

LAB HEAD: Christian Hackenberger

PROVIDER: PXD033004 | Pride | 2023-03-11

REPOSITORIES: Pride

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Publications

DFT-Guided Discovery of Ethynyl-Triazolyl-Phosphinates as Modular Electrophiles for Chemoselective Cysteine Bioconjugation and Profiling.

Stieger Christian E CE   Park Yerin Y   de Geus Mark A R MAR   Kim Dongju D   Huhn Christiane C   Slenczka J Sophia JS   Ochtrop Philipp P   Müchler Judith M JM   Süssmuth Roderich D RD   Broichhagen Johannes J   Baik Mu-Hyun MH   Hackenberger Christian P R CPR  

Angewandte Chemie (International ed. in English) 20220822 41


We report the density functional theory (DFT) guided discovery of ethynyl-triazolyl-phosphinates (ETPs) as a new class of electrophilic warheads for cysteine selective bioconjugation. By using Cu<sup>I</sup> -catalysed azide alkyne cycloaddition (CuAAC) in aqueous buffer, we were able to access a variety of functional electrophilic building blocks, including proteins, from diethynyl-phosphinate. ETP-reagents were used to obtain fluorescent peptide-conjugates for receptor labelling on live cells  ...[more]

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