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MetabolomicsSimultaneous Membrane and RNA Binding by Tick-Borne Encephalitis Virus Capsid Protein

Tick-borne encephalitis virus is an enveloped, pathogenic, RNA virus in the family Flaviviridae, genus Flavivirus. Viral particles are formed when the nucleocapsid, consisting of an RNA genome and multiple copies of the capsid protein, buds through the endoplasmic reticulum membrane and acquires ...

2023-01-06 | MTBLS6076 | MetaboLights
ProteomicsCellular proteins interacting with curved HIV-1 capsid lattices
Early events of HIV-1 lifecycle, such as post-entry virus trafficking, uncoating and nuclear import, remain poorly understood due to limited information about virus-host interactions. We used a multidisciplinary approach. First, a mass spectrometry (MS)-based proteomics methodology enabled us to ide...
ORGANISM(S): Homo sapiens (Human) 
2021-01-04 | PXD020970 | Pride
Hiv-1 Proteomics Human proteins Capsid 
TranscriptomicsExpression data from the hepatitis E virus capsid protein
The hepatitis E virus (HEV), a non enveloped RNA virus, causes viral hepatitis. The viral open reading frame 2 (ORF2) protein represents the capsid protein of HEV which is known to cause endoplasmic reticulum stress in ORF2 expressing cells. The initiation of endoplasmic reticulum stress induced apo...
ORGANISM(S): Homo sapiens 
2012-12-01 | E-GEOD-29061 | biostudies-arrayexpress
ProteomicsTop-down mass spectrometry analysis of capsid proteins of recombinant adeno-associated virus using multiple ion activations and proton transfer charge reduction
Here, we present our investigation of the viral proteins of the capsid of adeno-associated viruses via top-down mass spectrometry on the LC timescale. Characterization was improved through the use of proton transfer charge reduction
ORGANISM(S): Human Aav 
2024-06-14 | MSV000095045 | MassIVE
GenomicsAnalysis of VEEV Capsid Interaction Sites
Analysis of VEEV Capsid Interaction Sites
PRJNA545986 | ENA
ProteomicsDegraders of the dengue virus capsid protein exhibit differentiated pharmacology relative to capsid inhibitors
Due to the limited size of viral genomes, most viral proteins are multifunctional; yet most direct-acting antivirals are designed as single-function inhibitors. The dengue virus (DENV) capsid protein serves as a building block for new virions while also interacting with multiple host factors to remo...
ORGANISM(S): Homo sapiens (Human) 
2026-03-30 | PXD063557 | Pride
Degrader Dengue Capsin Virus Crbn Chemical biology Protac Ubiquitin 
GenomicsYFV Capsid changes to mRNA transcriptome of Huh7 cells
YFV Capsid changes to mRNA transcriptome of Huh7 cells
PRJNA639796 | ENA
GenomicsChromatin accessibility analysis of Huh7 cells upon YFV capsid expression
Chromatin accessibility analysis of Huh7 cells upon YFV capsid expression
PRJNA639846 | ENA
ProteomicsA novel capsid-XL32-derived adeno-associated virus serotype prompts retinal tropism and ameliorates choroidal neovascularization
Gene therapy has been adapted, from the laboratory to the clinic, to treat retinopathies. In contrast to subretinal route, intravitreal delivery of AAV vectors displays the advantage of bypassing surgical injuries, but the viral particles are more prone to be nullified by the host neutralizing facto...
ORGANISM(S): Adeno-associated Virus Predict_aav-6 
2023-12-04 | PXD047487 |
GenomicsSequencing of Echinococcus multilocularis densovirus non capsid protein 1 gene
Sequencing of Echinococcus multilocularis densovirus non capsid protein 1 gene
PRJEB29456 | ENA
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