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ProteomicsAlginate metabolic pathways of the strain C42 associated with Sargassum
Based on the genome sequencing and gene annotation, we analyzed the alginate lyases and other genes related to alginate metabolism of strain Vibrio sp. C42, with the highest alginate-degrading activity. Combined with proteome measurement, we proposed its alginate metabolic pathways.
ORGANISM(S): Vibrio atlanticus 
2026-06-04 | PXD037554 | Pride
Alginate Sargassum Alginate lyase Alginate metabolic pathway Vibrio 
ProteomicsCultivable Alginate Lyase-Excreting Bacteria Associated with Sargassum and their alginate metabolic pathways
Based on the genome sequencing and gene annotation, we analyzed the alginate lyases and other genes related to alginate metabolism of strain Vibrio sp. C42, with the highest alginate-degrading activity. Combined with secretome measurement, we proposed its alginate metabolic pathways.
ORGANISM(S): Vibrio atlanticus 
2026-06-04 | PXD029037 | Pride
Alginolytic bacteria Epiphyte Metabolic pathway Sargassum Alginate 
UnknownAn oxidative metabolic pathway of 4-deoxy-L-erythro-5-hexoseulose uronic acid (DEHU) from alginate in an alginate-assimilating bacterium.
Not available
S-EPMC8563752 | biostudies-literature
ProteomicsLC-MSMS study of hiPSC-derived β-like cells in different 3D Eevironments
In this project hiPSC-derived β-like cells were studied in two different 3D enviromnets; size-adjusted cell aggregates (using Aggrewell™ plates) and inside alginate capsules. The hiPSC derived from a patient with maturity-onset diabetes of the young 1 (MODY1), which is a monogenic diabetes form, cau...
ORGANISM(S): Homo sapiens (Human) 
2022-05-20 | PXD025054 | Pride
Nf4a Cell aggregates Tmt quantification Β-cell differentiation Global proteomics Crispr/cas9 Mody1 Hipsc Alginate encapsulation 
UnknownBacterial alginate metabolism: an important pathway for bioconversion of brown algae.
Not available
S-EPMC8286568 | biostudies-literature
ModelsGalazzo1990_FermentationPathwayKinetics
This a model from the article: Fermentation pathway kinetics and metabolic flux control in suspended and immobilized Saccharomyces cerevisiae Jorge L. Galazzo and James E. Bailey Enzyme and Microbial TechnologyVolume 12, Issue 3, 1990, Pages 162-172. D...
2024-09-02 | BIOMD0000000063 | BioModels
MetabolomicsMitochondrial Transplantation of Brown Adipocytes Interferes with the Metabolism of Tumor Stem Cells and Inhibits the Recurrence of Brain Glioma after Operation

Glioblastoma multiforme (GBM) is highly aggressive, with treatment resistance and recurrence driven by metabolically plastic glioma stem cells (GSCs). Inspired by brown adipose tissue (BAT) thermogenesis, researchers transplanted BAT-derived mitochondria (BA-Mito) into GSCs, reducing stemness mar...

2025-08-27 | MTBLS12901 | MetaboLights
TranscriptomicsGenes Required for and Effects of Inducible Alginate Overproduction by Growth of Pseudomonas aeruginosa on PIAAMV
Pseudomonas aeruginosa is an opportunistic pathogen that can adapt to changing environments and can secrete an exopolysaccharide known as alginate as a protection response resulting in a colony morphology and phenotype referred to as mucoid. However how P. aeruginosa senses its environment and acti...
ORGANISM(S): Pseudomonas aeruginosa 
2013-07-15 | E-GEOD-48429 | biostudies-arrayexpress
UnknownKdgF, the missing link in the microbial metabolism of uronate sugars from pectin and alginate.
Not available
S-EPMC4896693 | biostudies-literature
UnknownEnhanced Cypermethrin Degradation Kinetics and Metabolic Pathway in Bacillus thuringiensis Strain SG4.
Not available
S-EPMC7074683 | biostudies-literature
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