An Jian J - OmicsDI

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Unknown (743)
Proteomics (186)
Transcriptomics (78)
Genomics (36)
Metabolomics (16)
Models (2)
Other (1)

Organisms

Homo sapiens (145)
Mus musculus (45)
Drosophila melanogaster (9)
Arabidopsis thaliana (9)
Rattus norvegicus (9)
Bombyx mori (4)
Zea mays (3)
Zea mays subsp. mays (2)
Locusta migratoria (2)
Oryza sativa Japonica Group (2)
Danio rerio (2)
Vitis amurensis (1)
human oral metagenome (1)
Gossypium hirsutum (1)
Sedum alfredii (1)
Brassica rapa (1)
Oryza sativa Indica Group (1)
Sus scrofa (1)
Acinetobacter baumannii A424 (1)
Aedes aegypti (1)
Aphis craccivora (1)
Aspergillus (1)
Cynoglossus semilaevis (1)
Fragaria vesca (1)
Gallus gallus (1)
Gymnocypris przewalskii (1)
Haloferax volcanii (1)
Lentinula edodes (1)
Middle East respiratory syndrome-related coronavirus (1)
Mytilus coruscus (1)

Repository

iProX (97)
biostudies-arrayexpress (95)
pride (53)
EGA (20)
PAXDB (17)
MassIVE (16)
MetaboLights (14)
jPOST (3)
BioModels (2)
GNPS (2)
GPMDB (1)

Tissue

Cell culture (10)
Liver (7)
Heart (5)
Brain (4)
Leaf (4)
Plant cell (4)
Epithelial cell (3)
Fibroblast (3)
Lung (3)
Thyroid gland (3)
Whole body (3)
Blood cell (2)
Blood plasma (2)
Blood serum (2)
Colon (2)
Dendritic cell (2)
Esophagus (2)
Hepatocyte (2)
Ovary (2)
Permanent cell line cell (2)
Spleen (2)
Stomach (2)
Testis (2)
Adrenal gland (1)
Albumen gland (1)
Aorta (1)
Artery (1)
Blood (1)
Bone marrow (1)
PBMC cell line (1)

Disease

Disease free (2)
Non-alcoholic steatohepatitis (2)
Rheumatoid arthritis (2)
Adenocarcinoma (1)
Not Available (1)
Breast cancer (1)
Cervix carcinoma (1)
Malaria (1)
Marfan syndrome (1)
Mixed disorder as reaction to stress (1)
Polycystic Kidney (1)
Type 1 diabetes mellitus (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (53)
Shotgun proteomics (26)
Mass spectrometry (12)
Affinity purification coupled with mass spectrometry proteomics (11)
Data-dependent acquisition (6)
Bottom-up proteomics (4)
SWATH MS (4)
SRM/MRM (3)
Top-down proteomics (3)
Gel-based experiment (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
Data-independent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (6)
Liquid Chromatography MS - positive - reverse phase (6)
6550 iFunnel Q-TOF LC/MS (4)
Orbitrap Fusion Lumos (4)
Q Exactive (3)
Orbitrap Fusion (2)
Python (1)
Nugen Ovation SPIA; Wafergen’s Apollo liquid handler; KAPA Hyper Prep Library Kit (1)
QIAGEN TissueLyser II (1)
Isoflurane euthanasia chamber (1)
Nanodrop 2000c spectrophotometer (1)
Computer (1)
GenePix 4000B [Axon Instruments] (1)
Illumina HiSeq 1500 (1)
NextSeq 550 (1)
Illumina HiSeq 2000 (1)
Instrument (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Q Exactive HF (1)
Thermo Scientific TSQ Fortis (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - HILIC (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - hilic (1)

Publication Date

2022 (36)
2021 (31)
2024 (29)
2020 (29)
2023 (22)
2015 (21)
2025 (19)
2013 (17)
2012 (17)
2014 (15)
2026 (9)
2010 (9)
2018 (9)
2017 (9)
2011 (8)
2019 (8)
2007 (4)
2008 (3)
2016 (2)
2005 (1)

UNIPROT ID/AC

1433B_HUMAN (17)
1433E_HUMAN (17)
1433F_HUMAN (17)
1433G_HUMAN (17)
1433S_HUMAN (17)
1433T_HUMAN (17)
1433Z_HUMAN (17)
2A5A_HUMAN (17)
2A5D_HUMAN (17)
2A5E_HUMAN (17)
2A5G_HUMAN (17)
2AAA_HUMAN (17)
2ABA_HUMAN (17)
2ABD_HUMAN (17)
3BHS2_HUMAN (17)
3BP1_HUMAN (17)
3BP5L_HUMAN (17)
3HAO_HUMAN (17)
3HIDH_HUMAN (17)
3MG_HUMAN (17)
41_HUMAN (17)
4ET_HUMAN (17)
4F2_HUMAN (17)
5NT3A_HUMAN (17)
5NTC_HUMAN (17)
5NTD_HUMAN (17)
6PGD_HUMAN (17)
6PGL_HUMAN (17)
9606.ENSP00000228938 (17)
9606.ENSP00000233596 (17)

CHEBI ID

CHEBI:30769 (5)
CHEBI:15843 (4)
CHEBI:15891 (4)
CHEBI:15756 (3)
CHEBI:16359 (3)
CHEBI:16449 (3)
CHEBI:16525 (3)
CHEBI:16704 (3)
CHEBI:17351 (3)
CHEBI:17597 (3)
CHEBI:17895 (3)
CHEBI:18012 (3)
CHEBI:18388 (3)
CHEBI:21563 (3)
CHEBI:25017 (3)
CHEBI:27226 (3)
CHEBI:27266 (3)
CHEBI:27897 (3)
CHEBI:27994 (3)
CHEBI:28834 (3)
CHEBI:31459 (3)
CHEBI:32816 (3)
CHEBI:36005 (3)
CHEBI:6052 (3)
CHEBI:125610 (2)
CHEBI:125678 (2)
CHEBI:143235 (2)
CHEBI:143245 (2)
CHEBI:15318 (2)
CHEBI:15354 (2)

Metabolite Name

Arachidonic acid (3)
Dehydrocholic acid (3)
Leucine (3)
Uric acid (3)
Valine (3)
2-amino-3-methoxybenzoic acid (2)
4-hydroxybenzaldehyde (2)
4-indolecarbaldehyde (2)
7-methylxanthine (2)
Adenine (2)
Adenosine (2)
Alanine (2)
Azelaic acid (2)
Cholic acid (2)
Choline (2)
Citric acid (2)
Creatine (2)
Cynaroside (2)
Cytosine (2)
Deoxycholic acid (2)
Dihydrobiopterin (2)
Docosahexaenoic acid (2)
Ferulic acid (2)
Fumaric acid (2)
Glucose (2)
Glutamate (2)
Glycine (2)
Hesperetin (2)
Hispidulin (2)
Hypoxanthine (2)

IsPrivate

False (2)

Model Flag

Non Kinetic (2)

Modelling Approach

Constraint-based model (2)

Study type

Transcription profiling by array (51)
RNA-seq of coding RNA (16)
ChIP-seq (11)
Methylation profiling by high throughput sequencing (5)
RNA-seq of non coding RNA (3)
Comparative genomic hybridization by array (2)
Transcription profiling by SAGE (1)
RNAi profiling by array (1)
ChIP-chip by array (1)
Genotyping by array (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (114)
2022 (113)
2024 (100)
2023 (91)
2021 (59)
2020 (55)
2019 (40)
2015 (36)
2014 (35)
2017 (33)
2018 (30)
2012 (26)
2016 (24)
2013 (23)
2026 (19)
2010 (14)
2011 (13)
2008 (4)
2007 (4)
2005 (3)
1998 (1)

Lab affiliation

Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Department of Genetics, Stanford University (2)
Ascano Lab, Biochemistry Department, Vanderbilt University, Nashville TN, USA (1)
Beijing Key Laboratory of DNA Damage Response and College of Life Science, Capital Normal University, Beijing 100048, China (1)
Biomedicine Discovery Institute, Infection Program, Department of Microbiology, Monash University, Clayton, Victoria, Australia (1)
China Agricultural University (West Campus) College of Animal Science and Technology (1)
China National Rice Research Institute (1)
City University of Hong Kong (1)
College of Animal Sciences, Zhejiang University,Hangzhou, China (1)
Copenhagen Center for Glycomics, Department of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark. (1)
Department of Biology, Hong Kong Baptist University (1)
Department of Cardiology, Shanghai East Hospital, Tongji University School of Medicine, No. 150 Jimo Road, Shanghai 200120, China. (1)
Department of Clinical Chemistry and Transfusion Medicine at Institute of Biomedicine, SU Sahlgrenska 413 45 Gothenburg, Sweden (1)
Department of Clinical Chemistry and Transfusion Medicine, Institute of Biomedicine, University of Gothenburg, Gothenburg, Sweden (1)
Department of Clinical Pharmacy University of Michigan College of Pharmacy Ann Arbor, MI (1)
Department of Clinical Pharmacy, University of Michigan College of Pharmacy (1)
Department of Immunology, Xiangya School of Basic Medicine，Central South University, China (1)
Department of Infectious Diseases and the Key Lab of Endogenous Infection, Shenzhen Nanshan People's Hospital and The 6th Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen 518052, China (1)
Department of Laboratory Medicine, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden. (1)
Department of Laboratory Medicine, Sahlgrenska academy, University of Gothenburg, Gothenburg, Sweden (1)
Department of Pathophysiology, Key Laboratory of Ministry of Education for Neurological Disorders, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Pathophysiology, School of Basic Medicine, Key Laboratory of Ministry of Education of China for Neurological Disorders, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Pharmacy, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology (1)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
Department of Rheumatology and immunology, Second Xiangya Hospital of Central South University, No.139 Ren Min Middle Road (1)
Department of Rheumatology and immunology, Second Xiangya Hospital of South Central University, No.139 Ren Min Department of Rheumatology and immunology, Second Xiangya Hospital of South Central University, No.139 Ren Min Middle Road, Chang Sha,China41001111111rtment of Rheumatology and immunology, Second Xiangya Hospital of South Central University, No.139 Ren Min Mid6969Chang Sha,China410011d, Chang Sha,China410011 (1)
Département de Biologie Cellulaire Université de Genève Sciences III 30, quai Ernest-Ansermet CH - 1211 Genève 4, Switzerland (1)
Guangdong Provincial Key Laboratory of Pathogenic Biology and Epidemiology for Aquatic Economic Animal, Key Laboratory of Control for Disease of Aquatic Animals of Guangdong Higher Education Institutes, College of Fishery, Guangdong Ocean University, Zhanjiang, P.R. China. (1)
Institute of Hydrobiology, Chinese Academy of Sciences (1)
Institute of Microbiology, Shandong University, China (1)

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Comparing the efficacy and safety of atomization of traditional Chinese medicine Kai Hou Jian and budesonide suspension in adult acute laryngitis: a randomized control trial

Not available

S-EPMC9577730 | biostudies-literature

Arabidopsis Hrd1 complex - PAWH1 and PAWH2 are plant-specific components of an Arabidopsis endoplasmic reticulum-associated degradation complex

We are using the immunoprecipitation coupled with mass spectrometry to identify additional components of the Arabidopsis Hrd1-containing ERAD complex

ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress)

2019-08-15 | PXD013400 | Pride

Association between Xin An Jian Pitongbi Fang and self-perception of patient with osteoarthritis: A case-control study.

Not available

S-EPMC12599699 | biostudies-literature

Transcriptomic and metabolomic comparison of two Kandelia obovata cultivas in response to cold wave

Temperature is the primary environmental factor that restricts the growth and distribution of mangrove plants. With the escalating severity of global climate change, Kandelia obovata has gained widespread recognition as an ideal species for investigating the response mechanisms of mangroves to cold ...

2024-09-27 | MTBLS9845 | MetaboLights

Evaluation of significant features discovered from different data acquisition modes in mass spectrometry-based untargeted metabolomics

Despite the growing popularity of liquid chromatography-mass spectrometry (LC-MS)-based metabolomics, no study has yet to systematically compare the performance of different data acquisition modes in the discovery of significantly altered metabolic features, which is an important task of untarget...

2020-10-02 | MTBLS1842 | MetaboLights

Parsing the Q-Markers of Baoyin Jian to Treat Abnormal Uterine Bleeding by High-Throughput Chinmedomics Strategy.

Not available

S-EPMC10221270 | biostudies-literature

Jian-Pi-Yi-Shen Decoction Relieves Renal Anemia in 5/6 Nephrectomized Rats: Production of Erythropoietin via Hypoxia Inducible Factor Signaling.

Not available

S-EPMC6420977 | biostudies-literature

Potential Therapeutic Effects of Mi-Jian-Chang-Pu Decoction on Neurochemical and Metabolic Changes of Cerebral Ischemia-Reperfusion Injury in Rats.

Not available

S-EPMC9107056 | biostudies-literature

Pi-Dan-Jian-Qing Decoction Ameliorates Type 2 Diabetes Mellitus Through Regulating the Gut Microbiota and Serum Metabolism.

Not available