Apex2 proximity labelling

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xref:PubMed:32179799 (1)
xref:PubMed:35182477 (1)

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Proximity-dependent biotin labelling in yeast using the engineered ascorbate peroxidase APEX2.

Not available

S-EPMC5290329 | biostudies-literature

The GABARAP Co-Secretome Identified by APEX2-GABARAP Proximity Labelling of Extracellular Vesicles.

Not available

S-EPMC7349886 | biostudies-literature

4 RABs proxymity labelling - APEX2-mediated RAB proximity labeling identifies a role for RAB21 in clathrin-independent cargo sorting

APEX2-mediated proximity labeling was performed with 4 endosomal RABs allowed an efficient and comprehensive identification of their protein neighbors. APEX2-mediated proximity labeling was performed in triplicate. Protein enrichments obtained from all RABs were compared to APEX2-nude proximity labe...

ORGANISM(S): Homo sapiens (Human)

2019-01-07 | PXD010950 | Pride

Proximity proteomics reveals UCH-L1 as an essentialregulator of NLRP3-mediated IL-1β production in humanmacrophages and microglia

Activation of the NACHT, LRR family pyrin domain containing 3 (NLRP3) inflammasome complex is an essential innate immune signalling mechanism. To reveal how NLRP3 inflammasome assembly and activation are controlled, in particular by components of the ubiquitin system, proximity labelling, affinity p...

ORGANISM(S): Homo sapiens (Human)

2024-04-24 | PXD045862 | Pride

Affinity purification-mass spectrometry Apex2 proximity labelling Nlrp3 inflammasome

Proximity labelling reveals intracristal quality control in mitochondria

The intracristal space (ICS) is a distinct subdomain of the mitochondrial intermembrane space (IMS) where oxidative phosphorylation occurs. This region supposedly controls the dynamic demands regulating mitochondrial respiration; however, its other molecular components remain largely unknown. To rem...

ORGANISM(S): Homo sapiens (Human)

2025-07-02 | PXD039492 | Pride

Human Apex2 Mitochondria Cristae Proximity labelling

APEX2-proximity labelling of small heat shock protein condensates and aggregates

Small heat shock proteins are chaperones that are essential in preserving the integrity of the cellular proteome during stress conditions. The human genome encodes ten small heat shock proteins (HspB1-HspB10), which often form polydisperse multimeric functional structures. Uniquely, HspB2 and HspB3 ...

ORGANISM(S): Homo sapiens (Human)

2022-09-20 | PXD035040 | Pride

Human Hspb2 Apex2 Hek293t cells Protein aggregation Proximity labelling Liquid-liquid phase separation Small heat shock protein Hspb5

Yeast Sis1 proximity labelling during heat shock

Proximity interactome labelling of Sis1 APEX2 during heat shock revealed its comprehensive interactome.

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2023-08-18 | PXD039068 | Pride

Sis1 Heat shock Apex2 Proximity labeling

RBM6 proximity interactions (RBM6-APEX)

We sought to map RBM6 interactome using ascorbate peroxidase (APEX2)-based proximity labelling combined with mass spectrometry. Toward this end, we used CRISPR-cas9 methodology to establish MCF10A cell line expressing APEX2 fused to the N-terminal of RBM6, hereafter called MCF10AAPEX2-RBM6. The pero...

ORGANISM(S): Homo sapiens (Human)

2021-12-29 | PXD024295 | Pride

Rbm6 apex2 proximity interactions

APEX2 proximity labelling of FRS2 interactors in UW228 cells

The scaffold protein FRS2 is overexpressed in medulloblastoma (MB) and correlates with aggressive tumor phenotype and poor prognosis. Studies regarding FRS2's interactome have been limited to the assembly of the well described canonical FGFR signalosome. Here, we explored the proteomic proximity of ...

ORGANISM(S): Homo sapiens (Human)

2026-09-07 | PXD062524 | Pride

Human Medulloblastoma Interactors Apex2 Frs2

Charecterization of RBM42 interacting proteins in HCT116 cells with and without DNA damage

RNA binding motif protein 42 (RBM42) is an understudied gene mapped to 19q13.12 region and codes for a protein that consists of 480 amino acids, containing one RNA recognition motif (RRM) at its C-terminal region. We mapped the RBM42 interactome using ascorbate peroxidase (APEX2)-based proximity lab...

ORGANISM(S): Homo sapiens (Human)

2023-11-22 | PXD034854 | Pride

Apex2 Human Rbm42

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