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ModelsVilar2002_Oscillator
Minimal Model for Circadian Oscillations Citation Vilar JMG, Kueh HY, Barkai N, Leibler S, (2002) . Mechanisms of noise resistance in genetic oscillator...
2024-09-02 | BIOMD0000000035 | BioModels
GenomicsNucleosome positioning for 4 yeast species
We describe the genome-wide nucleosome profiles of four related yeast species. All species display the same global organization features first described in S. cerevisiae: a stereotypical nucleosome organization along genes, and the classification of promoters into these which contain or lack a prono...
ORGANISM(S): Saccharomyces cerevisiae 
2011-12-09 | E-GEOD-23577 | biostudies-arrayexpress
TranscriptomicsADH1 deletion cells upon growth on alternative carbon sources; Steady-state grown cells upon environmental perturbations
Cells must adjust their gene expression in order to compete in a constantly changing environment. Two alternative strategies could in principle ensure optimal coordination of gene expression with physiological requirement. First, the internal physiological state itself could feedback to regulated ge...
ORGANISM(S): Saccharomyces cerevisiae 
2007-02-28 | E-GEOD-6302 | biostudies-arrayexpress
TranscriptomicsNatural diversity in pentose fermentation is explained by variations in histone deacetylases
The extent to which carbon flux is directed towards fermentation vs. respiration differs between cell types and environmental conditions. Understanding the basic cellular processes governing carbon flux is challenged by the complexity of the metabolic and regulatory networks. To reveal the genetic b...
ORGANISM(S): Saccharomyces cerevisiae 
2015-12-04 | E-GEOD-75673 | biostudies-arrayexpress
TranscriptomicsRapid evolutionary adaptation to growth on an ‘unfamiliar’ carbon source
Cells constantly adapt to changes in their environment. In the majority of cases, the environment shifts between conditions that were previously encountered during the course of evolution, thus enabling evolutionary-programmed responses. In rare cases, however, cells may encounter a new environment ...
ORGANISM(S): Saccharomyces cerevisiae 
2015-12-17 | E-GEOD-76077 | biostudies-arrayexpress
TranscriptomicsReplication Timing in Yeast: CGH microarrays: S vs G1 cells in various stress conditions
Replication timing in Saccharomyces cerevisiae in various replication stress conditions using CGH microarrays of S vs G1 cells. Replication of the eukaryotic genomes follows a characteristic temporal program, with different regions replicating at different times in S phase. We describe a stochastic ...
ORGANISM(S): Saccharomyces cerevisiae 
2011-09-08 | E-GEOD-32002 | biostudies-arrayexpress
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