Bolt R R - OmicsDI

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Unknown (186)
Proteomics (26)
Transcriptomics (23)
Metabolomics (5)

Organisms

Homo sapiens (21)
Mus musculus (9)
Sus scrofa (6)
Saccharomyces cerevisiae (5)
Arabidopsis thaliana (3)
Ovis aries (2)
Bos taurus (1)
Bacteria (1)
Caenorhabditis elegans (1)
Escherichia coli (1)
Human alphaherpesvirus 1 (1)
Human alphaherpesvirus 1 strain KOS (1)
Trypanosoma brucei (1)
Verticillium dahliae JR2 (1)

Repository

pride (26)
biostudies-arrayexpress (23)
MetaboLights (5)

Tissue

Cell culture (5)
Brain (4)
Liver (4)
Blood plasma (2)
Heart (2)
Kidney (2)
Muscle (2)
B cell (1)
Blood cell (1)
Blood serum (1)
Cell suspension culture (1)
Fibroblast (1)
HeLa cell (1)
Leaf (1)
Lung (1)
Permanent cell line cell (1)
Skeletal muscle (1)
Skeletal muscle fiber (1)
Trophoblast (1)

Disease

T. circumcincta infection (1)
Normal (1)
Acute leukemia (1)
Bone sarcoma (1)
Glycogen storage disease (1)
Peripheral primitive neuroectodermal tumor (1)
Trypanosomiasis (1)

Technology Type

Mass Spectrometry (26)
Shotgun proteomics (9)
Affinity purification coupled with mass spectrometry proteomics (6)
Mass spectrometry (5)
Gel-based experiment (5)
Bottom-up proteomics (4)
Data-dependent acquisition (3)
Data-independent acquisition (3)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
MSE (1)

Instrument Platform

Illumina NovaSeq 6000 (10)
Illumina HiSeq 4000 (5)
Direct infusion MS - negative (4)
Hamamatsu Nanozoomer S60 (1)
Agilent Tapestation 4200 (1)
Single cells were captured using the 10x Genomics Chromium Controller. (1)
NextSeq 2000 (1)
NextSeq 500 (1)
Direct infusion MS - (1)
Direct infusion MS - positive (1)

Publication Date

2022 (15)
2026 (6)
2024 (6)
2021 (6)
2025 (5)
2013 (4)
2019 (3)
2020 (2)
2011 (2)
2017 (2)
2014 (1)
2012 (1)
2004 (1)

CHEBI ID

CHEBI:138900 (2)
CHEBI:28842 (2)
CHEBI:85698 (2)
CHEBI:131608 (1)
CHEBI:132032 (1)
CHEBI:132034 (1)
CHEBI:132037 (1)
CHEBI:132489 (1)
CHEBI:132503 (1)
CHEBI:132731 (1)
CHEBI:133719 (1)
CHEBI:134012 (1)
CHEBI:134236 (1)
CHEBI:134237 (1)
CHEBI:134265 (1)
CHEBI:134435 (1)
CHEBI:134487 (1)
CHEBI:135533 (1)
CHEBI:135821 (1)
CHEBI:136225 (1)
CHEBI:136262 (1)
CHEBI:136479 (1)
CHEBI:136489 (1)
CHEBI:137155 (1)
CHEBI:137164 (1)
CHEBI:137228 (1)
CHEBI:137570 (1)
CHEBI:137653 (1)
CHEBI:137655 (1)
CHEBI:138860 (1)

Metabolite Name

(25R)-3beta,4beta-dihydroxycholest-5-en-26-oate(1-) (1)
(S)-Succinyldihydrolipoamide (1)
(Z)-22-Hentriacontene-2,4-dione (1)
1,2-Epoxy-1,2,7,7',8,8',11,12-octahydro-psi,psi-carotene (1)
1,20-Eicosanediol (1)
2-Amino-3-carboxymuconic acid semialdehyde (1)
24,25,26,27-Tetranor-23-oxo-hydroxyvitamin D3 (1)
3'-Deaminofusarochromanone (1)
3-(3-hydroxyphenyl)-2-phenyl-4-[(E)-2-phenylethenyl]-2,3-dihydro-1-benzofuran-6-ol (1)
5-Hydroxy-6-methoxyindole glucuronide (1)
6-[(3-carboxy-3-hydroxy-2-{[3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyl]oxy}propanoyl)oxy]-3,4,5-trihydroxyoxane-2-carboxylic acid (1)
9-cis-beta-Carotene (1)
Albanin F (1)
Artemoin C (1)
Bis(4-isothiocyanatobutyl) disulfide (1)
Brassinolide (1)
Bufotenine O-glucoside (1)
Cer(d49:0) (1)
Cholest-5-ene (1)
DG(16:0) (1)
DG(35:3) (1)
DG(36:3) (1)
DG(36:4) (1)
DG(36:5) (1)
DG(40:6) (1)
DHAP(8:0) (1)
Epoxymurin A (1)
Epoxysiderol (1)
Erosnin (1)
Ethyl 2-(methyldithio)propionate (1)

Study type

Transcription profiling by array (9)
RNA-seq of coding RNA from single cells (8)
ATAC-seq (2)
Human - Single-cell sequencing (1)
Spatial transcriptomics by high-throughput sequencing (1)
RNA-seq of total RNA (1)
RNA-seq of coding RNA (1)

Release Date

2022 (34)
2021 (34)
2025 (32)
2024 (24)
2023 (18)
2020 (13)
2019 (9)
2018 (8)
2017 (7)
2016 (7)
2026 (5)
2013 (5)
2015 (5)
2011 (3)
2014 (2)
2012 (1)
2004 (1)
2006 (1)

Lab affiliation

Laboratory of Pediatrics, UMCG, The Netherlands (2)
Baxter Laboratory for Stem Cell Biology Department of Microbiology & Immunology Stanford University School of Medicine (1)
CECAD Research Center, Institute for Genetics, University of Cologne, 50931 Cologne, Germany (1)
CECAD Research Center, Institute for Genetics, University of Cologne, Joseph-Stelzmann-Str. 26, 50931 Cologne, Germany (1)
Claudia Fecher-Trost Experimental and Clinical Pharmacology and Toxicology, Center for Molecular Signaling (PZMS), Saarland University, Buildings 46, D-66421 Homburg, Germany (1)
Core Unit Mass Spectrometry and Proteomics Medical faculty Ulm University Germany (1)
Department of Biochemistry & Molecular Biology, Michigan State University (1)
Department of Biochemistry, Max F. Perutz Laboratories, University of Vienna, Dr. Bohrgasse 9, 1030 Vienna, Austria (1)
Department of Pathology, University of Cambridge (1)
Department of Pediatrics, University of Groningen, University Medical Center Groningen; Groningen, The Netherlands (1)
Institute for Genetics, Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), Cologne, Germany (1)
Institute for Research in Biomedicine (IRB Barcelona) Barcelona Institute of Science and Technology (BIST) C/ Baldiri Reixac, 10-12 08028 Barcelona - Spain. (1)
Institute of Science and Technology Austria (ISTA) (1)
Intercollegiate Faculty of Biotechnology, University of Gdansk and Medical University of Gdansk, 58 Abrahama St., 80-307 Gdansk, Poland (1)
Lady Davis Institute, McGill University (1)
Michael Swann Building Max Born Crescent The University of Edinburgh Edinburgh EH9 3BF (1)
Optys Tech Corporation (1)
Research and Diagnostic Institute of Pathology, Medical University of Graz, Stiftingtalstrasse 6, 8010 Graz, Austria; Faculty of Technical Chemistry, Institute of Chemical Technologies and Analytics, Technische Universität Wien, Getreidemarkt 9/164, 1060 Vienna, Austria (1)
Rush University Medical Center (1)
Seoul National University (1)
UNSW Sydney (1)
University of Edinburgh Institute of Immunology and Infection Research (1)
University of Göttingen, Institute of Microbiology and Genetics, Department of Molecular Microbiology and Genetics (1)
University of Manchester (1)
University of Nottingham and QMC (1)

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Bolt: A new age peptide search engine for comprehensive MS/MS sequencing through vast protein databases in minutes

The standard platform for proteomics experiments today is mass spectrometry, particularly for samples derived from complex matrices. Recent increases in mass spectrometry sequencing speed, sensitivity and resolution now permit comprehensive coverage of even the most precious and limited samples, par...

ORGANISM(S): Homo sapiens (Human)

2019-08-29 | PXD012700 | Pride

Testing the psychometric characteristics of EQ-5D-5L and respiratory bolt-ons using a sample of the Australian population.

Not available

S-EPMC11865160 | biostudies-literature

Response to low R/FR light ratio in wt and brc1 mutant Arabidopsis axillary buds

To study the transcriptomic profile of wt and brc1 mutant axillary buds during the shade avoidance response, we simulated a canopy shade with a low R/FR light ratio. We treated plants with white light supplemented with far-red light (Red light = 29 Î¼einstein Â· m-2 seg-1, Far-Red light= 146 Î¼einst...

ORGANISM(S): Arabidopsis thaliana

2013-02-28 | E-GEOD-27273 | biostudies-arrayexpress

Dual-Locking the SARS-CoV-2 Spike Trimer: An Amphipathic Molecular "Bolt" Stabilizes Conserved Druggable Interfaces for Coronavirus Inhibition.

Not available

S-EPMC12279193 | biostudies-literature

Content validity of the EQ-5D-5L with skin irritation and self-confidence bolt-ons in patients with atopic dermatitis: a qualitative think-aloud study.

Not available

S-EPMC10784357 | biostudies-literature

Long-term efficacy and safety of sonidegib in patients with advanced basal cell carcinoma: 42-month analysis of the phase II randomized, double-blind BOLT study.

Not available

S-EPMC7318253 | biostudies-literature

RNA-seq of a controlled porcine model of trauma and haemorrhagic shock treated by fluid resuscitation against untreated controls

This was a randomised study in terminally anaesthetised female cross-bred Large White pigs. Initially, animals were anaesthetised and instrumented for continuous physiological monitoring and sampling; blood samples were collected upon initiation of the surgery (line-in, T = -150 minutes). Following ...

ORGANISM(S): Sus scrofa

2026-10-28 | E-MTAB-16011 | biostudies-arrayexpress

A nut-and-bolt assembly of the bimodular large progenitor botulinum neurotoxin complex.

Not available

S-EPMC12383247 | biostudies-literature

Integration of diverse DNA substrates by a casposase can be targeted to R-loops in vitro by its fusion to Cas9.

Not available

S-EPMC7786333 | biostudies-literature

Long-term efficacy and safety of sonidegib in patients with locally advanced and metastatic basal cell carcinoma: 30-month analysis of the randomized phase 2 BOLT study.

Not available

S-EPMC5873455 | biostudies-literature