Cenp-e - OmicsDI

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Single-Cell Extraction: For enzymatic digestion, pronase (Septomyces argeus, 1 mg/mL) was applied for 25 minutes at room temperature for P0 to P8 datasets. Cells were dissociated and triturated into a single-cell suspension in ACSF supplemented with 1% fetal calf serum (FCS) and DNase (1 µL/10 mL). Trituration was performed using three glass Pasteur pipettes of decreasing diameters. For P30 datasets, enzymatic digestion and cell dissociation were carried out using the Worthington Papain Dissociation System, following the manufacturer’s instructions. Single-Nuclei Extraction: For nuclei isolation, the Hibernate™-E Medium was removed, and 500 µL of chilled 0.1X NP40 Lysis Buffer was added. Tissue was homogenized using a Pellet Pestle (15 strokes) and incubated on ice for 5 minutes. The suspension was pipette-mixed 10 times using a wide-bore pipette tip and incubated for an additional 10 minutes on ice. Following lysis, 500 µL of chilled wash buffer was added, and the mixture was pipette-mixed 5 times using a regular-bore pipette tip. The suspension was filtered through a 30 µm cell strainer into a 50 mL tube to remove debris. The filtered suspension was transferred to a 1.5 mL tube and centrifuged at 950 × g for 10 minutes at 4°C. The supernatant was carefully removed, and the nuclei pellet was retained for downstream analysis. (1)
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CHEBI ID

CHEBI:141266 (1)
CHEBI:141265 (1)
CHEBI:141264 (1)
CHEBI:141239 (1)
CHEBI:141234 (1)
CHEBI:141305 (1)
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CHEBI:86976 (1)
CHEBI:138570 (1)
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CHEBI:71728 (1)
CHEBI:141289 (1)
CHEBI:85691 (1)
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CHEBI:85698 (1)
CHEBI:86980 (1)
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CHEBI:141310 (1)
CHEBI:141309 (1)
CHEBI:136262 (1)
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CHEBI:136258 (1)
CHEBI:141304 (1)
CHEBI:141303 (1)
CHEBI:136268 (1)
CHEBI:132773 (1)
CHEBI:141295 (1)
CHEBI:140894 (1)

Metabolite Name

Triacylglycerol 60:8 (1)
Triacylglycerol 60:7 (1)
Triacylglycerol 60:6 (1)
Triacylglycerol 60:5 (1)
Triacylglycerol 60:4 (1)
Triacylglycerol 60:3 (1)
Triacylglycerol 60:2 (1)
Triacylglycerol 60:1 (1)
Triacylglycerol 60:0 (1)
Triacylglycerol 58:8 (1)
Triacylglycerol 58:7 (1)
Triacylglycerol 58:6 (1)
Triacylglycerol 58:5 (1)
Triacylglycerol 58:4 (1)
Triacylglycerol 58:3 (1)
Triacylglycerol 58:2 (1)
Triacylglycerol 58:1 (1)
Triacylglycerol 58:0 (1)
Triacylglycerol 56:9 (1)
Triacylglycerol 56:8 (1)
Triacylglycerol 56:1 (1)
Triacylglycerol 56:0 (1)
Triacylglycerol 54:9 (1)
Triacylglycerol 54:8 (1)
Triacylglycerol 54:1 (1)
Triacylglycerol 54:0 (1)
Triacylglycerol 52:9 (1)
Triacylglycerol 52:8 (1)
Triacylglycerol 52:7 (1)
Triacylglycerol 50:8 (1)

First Public Date

2026 (1)
2024 (1)
2021 (1)
2018 (1)
2017 (1)
2015 (1)

Study type

Transcription profiling by array (64)
ChIP-seq (18)
RNA-seq of coding RNA (8)
ChIP-chip by tiling array (7)
ChIP-chip by array (6)
Methylation profiling by array (4)
RNA-seq of coding RNA from single cells (4)
Spatial transcriptomics by high-throughput sequencing (3)
Comparative genomic hybridization by array (3)
Unknown experiment type (2)
Other (2)
Cell line - One-color microarray (1)
Transcription profiling by tiling array (1)
DNA-seq (1)

Release Date

2015 (24)
2013 (22)
2011 (19)
2014 (18)
2012 (18)
2010 (17)
2008 (15)
2023 (14)
2009 (10)
2025 (9)
2022 (9)
2018 (9)
2020 (8)
2016 (8)
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2021 (6)
2007 (5)
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2019 (5)
2004 (5)
2006 (4)
2003 (4)
2001 (3)
2017 (2)
2005 (1)
2002 (1)
2000 (1)
1999 (1)
1998 (1)

Lab affiliation

Head of the Curie Institute Mass Spectrometry Platform (1)
Hubrecht Institute, Royal Netherlands Academy of Arts and Sciences (KNAW), Uppsalalaan 8, 3584CT, Utrecht, the Netherlands. (1)
Ist. G. Gaslini (1)
Molecular Genetics, RPTU Kaiserslautern (1)
National Center of Biomedical Analysis (1)

Tags

xref:PubMed:34573304 (1)
xref:PubMed:29279323 (1)
xref:PubMed:26697328 (1)
xref:PubMed:26144554 (1)
xref:PubMed:28636931 (1)

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MS for identifying CENP-E ubiquitination sites and MS for GST-Ub4 interacting proteins

LUBAC mediates the linear ubiquitination of CENP-E and facilitates the anchoring of CENP-E by KNL1 at attached kinetochores

ORGANISM(S): Homo sapiens (Human)

2019-01-28 | PXD011786 | Pride

Cenp-e Knl1

A farnesyl-dependent structural role for CENP-E in expansion of the fibrous corona

Correct chromosome segregation during cell division depends on proper connections between spindle microtubules and kinetochores. During prometaphase, kinetochores are temporarily covered with a dense protein meshwork known as the fibrous corona. Formed by oligomerization of ROD/ZW10/ZWILCH-SPINDLY (...

ORGANISM(S): Homo sapiens (Human)

2023-10-09 | PXD040338 | Pride

Cenp-e Farnesylation Kinetochores Chromosome segregation Rod/zw10/zwilch-spindly (rzz-s) complex

Transcriptomic changes following CENP-E partial depletion in normal human fibroblasts

PRJNA751029 | ENA

Expression data in HeLa cells treated with CENP-E siRNA or Eg5 siRNA in the presence of BubR1 siRNA

The molecular mechanism responsible for cell fate after mitotic slippage is unclear. We investigate the postmitotic effects of different mitotic aberrations, misaligned chromosomes produced by CENP-E siRNA (siCENP-E), and monopolar spindles resulting from Eg5 siRNA (siEg5). To determine which signal...

ORGANISM(S): Homo sapiens

2015-06-25 | E-GEOD-67905 | biostudies-arrayexpress

Transcriptomic changes following CENP-E partial depletion in normal human fibroblasts

Being CENP-E function restricted to mitosis, its haploinsufficiency has been used to study the induced cell aneuploidy. However, the gene expression profile triggered by CENP-E reduction in normal cells has never been explored. To fill this gap, here we investigated whether a gene network associated...

ORGANISM(S): Homo sapiens

2021-10-06 | GSE181191 | GEO

Chromosome congression is promoted by CENP-Q- and CENP-E-dependent pathways.

Not available

S-EPMC4282051 | biostudies-literature

Microtubule capture by mitotic kinesin centromere protein E (CENP-E).

Not available

S-EPMC3408146 | biostudies-literature

KIF18A promotes chromosome congression in cooperation with CENP-E downstream of CENP-C.

Not available

S-EPMC12834474 | biostudies-literature

Reduced expression of cenp-e in human hepatocellular carcinoma.