Sort   by:  
 Page size 
UnknownNew glycoproteomics software, GlycoPep Evaluator, generates decoy glycopeptides de novo and enables accurate false discovery rate analysis for small data sets.
Not available
S-EPMC4165450 | biostudies-literature
ProteomicsHuman serum N-linked intact glycopeptides LC-MS/MS
Large-scale identification of N-linked intact glycopeptides by liquid chromatography coupled tandem mass spectrometry (LC-MS/MS) in human serum is challenging due to the wide dynamic range of serum protein abundances, the lack of a complete serum N-Glycan database and the existence of non-specifical...
ORGANISM(S): Armoracia rusticana Homo sapiens (Human) Gallus gallus (Chicken) 
2020-04-21 | PXD015622 | Pride
N-linked intact glycopeptide Co-elution Spectral library search Human serum Isotopic distribution 
ProteomicsA magnetic bead-based workflow for sensitive and streamlined cell surface proteomics
Cell-surface proteins represent an important class of molecules for therapeutic targeting and defining cellular phenotypes. However, their enrichment and detection via mass spectrometry-based proteomics remains challenging due to low abundance, posttranslational modifications, hydrophobic regions, a...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2024-01-21 | PXD043678 | Pride
Lc-ms  mass spectrometry  surfaceomics  cell surface capture  n-glycopeptide enrichment  plasma membrane n-glycoprotein 
ProteomicsGlycoproteome of Human lung cancer cell by LC-MSMS
We demonstrate the utility of lectin-magnetic nanoprobe coupled with Orbitrap HCD-CID-MS/MS for complementary glycotope-specific enrichment and site-specific glycosylation analysis of the glycoproteome. Using non-small cell lung cancer (NSCLC) cells as model, this approach allowed us to compare the ...
ORGANISM(S): Homo sapiens (Human) 
2022-02-25 | PXD010035 | Pride
Lc-msms Lung cancer cell Human Glycoproteom 
ProteomicsAnalysis of N-glycosylation sites in proteins of Bothrops venoms: identification of intact N-glycopeptides.
This study explored the N-glycosylation profile of seven Bothrops venoms (B. alcatraz, B. cotiara, B. fonsecai, B. insularis, B. jararaca, B. jararacussu and B. moojeni).
ORGANISM(S): Bothrops sp. 
2025-11-17 | PXD057219 | Pride
Intact glycopeptide analysis Bothrops  snake venom  n-glycosylation 
ProteomicsMucin-type O-glycosylation Landscapes of SARS-CoV-2 Spike Proteins
The densely glycosylated spike (S) proteins that are highly exposed on the surface of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) facilitate viral attachment, entry, and membrane fusion. We have previously reported all the 22 N-glycosites and site-specific N-glycans in the S protein...
ORGANISM(S): Homo sapiens (Human) 
2021-11-03 | PXD022896 | Pride
Sars-cov-2 O-glycosylation Mass spectrometry Spike protein 
ProteomicsInfluenza A hemagglutinin glycoproteomics similarity
Influenza A virus (IAV) mutates rapidly, preventing a single seasonal vaccine from targeting more than one strain, and year-to-year vaccine effectiveness is low. One challenge in designing effective vaccines is that genetic mutations frequently cause amino acid variations in IAV envelope protein hem...
ORGANISM(S): Viruses Homo sapiens (Human) Gallus gallus (Chicken) 
2020-07-03 | PXD018920 | Pride
Glycosylation Influenza a Lc-ms Similarity Glycopeptides 
Genomics
Clinical isolates of Myroides from Instituto Nacional de Rehabilitacion
PRJNA1094452 | ENA
UnknownGlycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics.
Not available
S-EPMC10329677 | biostudies-literature
UnknownElectron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis.
Not available
S-EPMC8329938 | biostudies-literature
Sort   by:  
 Page size