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TranscriptomicsIdentification of differentially methylated regions between placentas and maternal blood cells on chromosome 18
Comparison of DNA methylation levels of chromosome 18 between placentas and blood cells of pregnant women Extracted DNA from 5 cases of placental tissues and 5 cases of maternal blood cell was subjected to MeDIP (methylated DNA immunoprecipitation) and hybridized to Affymetrix GeneChip® Human Tiling...
ORGANISM(S): Homo sapiens 
2010-12-22 | E-GEOD-22837 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of Saccharomyces boulardii and Saccharomyces cerevisiae to determine genomic differences
A comparative genomic hybridisation experiment using Affymetrix YG-S98 arrays to study the genetic background of S. Boulardii compared to S. Cerevisiae strain BY4743. Background: Saccharomyces boulardii, a yeast that was isolated from fruit in Indochina has been used as a remedy for diarrhoea since ...
ORGANISM(S): Saccharomyces boulardii 
2006-11-10 | E-MAXD-15 | biostudies-arrayexpress
UnknownChanges in the proteome of the problem weed blackgrass correlating with multiple-herbicide resistance.
Not available
S-EPMC5969246 | biostudies-literature
TranscriptomicsQuantitative Analysis of Transcription Dynamics in Pluripotent and Differentiated Cells
Cellular identity is a direct consequence of the transcriptional output for any given cell type. Understanding the regulatory properties of the genes that define each cell type is of fundamental importance. In this study, we performed a detailed characterization of the gene expression profiles in em...
ORGANISM(S): Mus musculus 
2014-09-19 | E-GEOD-61540 | biostudies-arrayexpress
ProteomicsThe Itgb3 Adhesome - Integrin β3 is seen as a key anti-angiogenic target for cancer treatment due to its expression on neovasculature
Integrin β3 is seen as a key anti-angiogenic target for cancer treatment due to its expression on neovasculature, but the role it plays in the process is complex; whether it is pro- or anti-angiogenic depends on the context in which it is expressed. To understand precisely β3’s role in regulating i...
ORGANISM(S): Mus musculus (Mouse) 
2018-05-23 | PXD008591 | Pride
Angiogenesis Vasculature Cell adhesion Focal adhesions Endothelial cells Cancer Microtubules Cell migration Integrins 
TranscriptomicsLinking toxicant physiological mode of action with induced gene expression changes in Caenorhabditis elegans: atrazine
Physiologically based modelling using DEBtox (dynamic energy budget in toxicology) and transcriptional profiling were used in Caenorhabditis elegans to identify how physiological modes of action, as indicated by effects on system level resource allocation were associated with changes in gene express...
ORGANISM(S): Caenorhabditis elegans 
2010-03-23 | E-GEOD-21008 | biostudies-arrayexpress
TranscriptomicsGenomeTiling
Samples were purchased from Clontech as mRNA. Hybridization material was generated through a random-priming amplification procedure (RP-AMP) using primers with a random sequence at the 3' end and a fixed motif at the 5' end. shDNP256 (first strand synthesis): 5'- TAG ATG CTG TTG NNN NNN NNN -3' sh...
ORGANISM(S): Homo sapiens 
2004-03-03 | E-GEOD-1097 | biostudies-arrayexpress
TranscriptomicsLinking toxicant physiological mode of action with induced gene expression changes in Caenorhabditis elegans: fluoranthene
Physiologically based modelling using DEBtox (dynamic energy budget in toxicology) and transcriptional profiling were used in Caenorhabditis elegans to identify how physiological modes of action, as indicated by effects on system level resource allocation were associated with changes in gene express...
ORGANISM(S): Caenorhabditis elegans 
2010-05-05 | E-GEOD-21011 | biostudies-arrayexpress
TranscriptomicsExon and junction microarrays detect widespread mouse strain- and sex-bias expression differences
71 liver RNA samples from three mouse strains - DBA/2J, C57BL/6J and C3H/HeJ - were profiled using a custom-designed microarray monitoring exon and exon-junction expression of 1,020 genes representing 9,406 exons. Gene expression was calculated via two different methods, using the 3'-most exon prob...
ORGANISM(S): Mus musculus 
2010-05-25 | E-GEOD-10736 | biostudies-arrayexpress
TranscriptomicsLinking toxicant physiological mode of action with induced gene expression changes in Caenorhabditis elegans: cadmium
Physiologically based modelling using DEBtox (dynamic energy budget in toxicology) and transcriptional profiling were used in Caenorhabditis elegans to identify how physiological modes of action, as indicated by effects on system level resource allocation were associated with changes in gene express...
ORGANISM(S): Caenorhabditis elegans 
2010-05-05 | E-GEOD-21010 | biostudies-arrayexpress
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