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TranscriptomicsBulk RNA-seq of Adult and Fetal Enteroids (Control or Treated with DBZ)
Bulk RNA sequencing data of both adult and fetal enteroid lines cultured for 1 or 3 days. Conditions include enteroids grown in control basal media and basal media with the notch inhibitor DBZ added.
ORGANISM(S): Homo sapiens 
2022-04-08 | E-MTAB-11619 | biostudies-arrayexpress
GenomicsChicken Enteroids
Transcriptome of chicken (Gallus gallus) enteroids
PRJEB37491 | ENA
ProteomicsProteomic and functional profiling of suspended jejunal enteroids reveals physiological and pharmacokinetic fidelity to native intestine
Intestinal enteroids are “mini-guts” that recapitulate essential features of the intestinal epithelium in vitro. We developed and characterized native basal-out (BO) and morphogenically everted apical-out (AO) jejunal enteroids cultured in suspension. Using quantitative proteomics, we show that thes...
ORGANISM(S): Homo sapiens (Human) 
2026-08-21 | PXD067571 | Pride
Pbpk modeling Proteomics Drug metabolism Enteroids Live-cell microscopy Drug transport Human small intestine 
GenomicsTranscriptional response of NGN3 J2 enteroids
Transcriptional response of NGN3 J2 enteroids
PRJNA575547 | ENA
GenomicsTranscriptional response of NGN3 J2 enteroids.
Transcriptional response of NGN3 J2 enteroids.
PRJNA1118255 | ENA
ProteomicsQuantitative proteomic SILAC analysis of enteroids deleted for Hdac1 or Hdac2
We have exploited organoid SILAC approaches that we have previously developed (A SILAC-Based Method for Quantitative Proteomic Analysis of Intestinal Organoids.- Gonneaud A, Jones C, Turgeon N, Lévesque D, Asselin C, Boudreau F, Boisvert FM. -Sci Rep. 2016 Nov 30;6:38195. doi: 10.1038/srep38195) to ...
ORGANISM(S): Mus musculus (Mouse) 
2019-11-14 | PXD011869 | Pride
Intestin Hdac2 Enteroid Silac Hdac1 
GenomicsChicken Enteroids 2
Temporal transcriptome profiling of chicken (Gallus gallus) enteroids
PRJEB51227 | ENA
Genomicssingle-cell RNA sequencing for enteroids treated with IL-17
single-cell RNA sequencing for enteroids treated with IL-17
PRJNA756284 | ENA
GenomicsHuman norovirus efficiently replicates in differentiated 3D-human intestinal enteroids
Human norovirus efficiently replicates in differentiated 3D-human intestinal enteroids
PRJNA843063 | ENA
GenomicsTranscriptional Response to Pool Human Milk Exosomes in Infant Ileal Intestinal Enteroids
Transcriptional Response to Pool Human Milk Exosomes in Infant Ileal Intestinal Enteroids
PRJNA1419770 | ENA
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