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ProteomicsA comprehensive portrait of tissue-, age- and sex-specific DNA modifications in rodents and humans
DNA damage causes genomic instability underlying many diseases, with traditional analytical approaches providing minimal insight into the spectrum of DNA lesions in vivo. Here we used untargeted chromatography-coupled tandem mass spectrometry-based adductomics (LC-MS/MS) to define the landscape of D...
ORGANISM(S): Homo sapiens (Human) Rattus norvegicus (Rat) 
2023-09-12 | PXD045311 | Pride
Adductomics Strp mrm 
UnknownCD24 genetic variants contribute to overall survival in patients with gastric cancer.
Not available
S-EPMC4735012 | biostudies-literature
TranscriptomicsIdentification and characterization of cold responsive microRNAs in tea plant (Camellia sinensis) based on high-throughput sequencing and their targets using degradome analysis [microarray]
Solexa sequencing technology was used to perform high throughput sequencing of the small RNA library from the cold treatment of tea leaves. Subsequently, aligning these sequencing date with plant known miRNAs, we characterized 112 C. sinensis conserved miRNAs. In addition, 215 potential candidate mi...
ORGANISM(S): Camellia sinensis 
2015-05-14 | E-GEOD-53632 | biostudies-arrayexpress
UnknownRelationship Investigation between C(sp2)-X and C(sp3)-X Bond Energies Based on Substituted Benzene and Methane.
Not available
S-EPMC7409257 | biostudies-literature
no omics definedTranscription profiling of multiple karp tissues under cold acclimation treatments
To screen for genes involved in cold-acclimation in carp
ORGANISM(S): Cyprinus carpio 
2005-11-09 | E-MAXD-1 | biostudies-arrayexpress
MetabolomicsPharmacological Targeting of ALDH1a2 in Dendritic Cells Enhances Antigen Presentation, T Cell Activation and Anti-tumor immunity
Dendritic cell (DC) vaccines have been proposed as cancer immunotherapies due to their role as crucial antigen-presenting cells that regulate T cell functions. Despite considerable efforts to optimize ex vivo priming of DCs, DC vaccines have rarely been successful, suggesting the presence of unknown...
2025-11-03 | MTBLS10389 | MetaboLights
UnknownCu-Ferrocene-Functionalized CaO2 Nanoparticles to Enable Tumor-Specific Synergistic Therapy with GSH Depletion and Calcium Overload.
Not available
S-EPMC8292872 | biostudies-literature
ProteomicsIdentification of PRMT1 interaction proteins in cancer and neural stem cells
We have showed that cancer cells (or tumorigenic cells) resemble neural stem/progenitor cells in regulatory network, tumorigenicity and differentiation potential. We have shown PRMT1 is a protein that is upreguated in and promotes vaious cancers. The expression of its gene is localized to embryonic ...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2021-12-20 | PXD026851 | Pride
Ne-4c Prmt1 Hepg2 Lc-ms/ms 
TranscriptomicsAcidianus filamentous virus 2
Cold stress greatly affects plant growth and crop yield. To identify novel genes and possible mechanisms involved in chilling tolerance responses in rice seedlings, RNA sequencing (RNA-seq) technology was used for genome-wide gene expression profiling analysis to compare three cold-tolerant genotype...
ORGANISM(S): Oryza sativa 
2013-07-11 | E-MTAB-4407 | biostudies-arrayexpress
ProteomicsIdentification of Setdb1 interaction proteins in neural stem cells
Setdb1 is an epigenetic factors catalyzing modification of H3K9me3. Expression of its gene is localized to embryonic neural cells during vertebrate embryogenesis, suggesting its role in regulating neural stemness. The project is to identify the interaction partners of Setdb1, by which Setdb1 regulat...
ORGANISM(S): Mus musculus (Mouse) 
2022-08-12 | PXD030453 | Pride
Setdb1 Neural stem cell Lc-ms/ms 
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