Sort   by:  
 Page size 
ProteomicsEvaluation of two methods for LS-MS/MS proteomic analysis of formalin fixed and paraffin embedded tissues
The proteomics of archival samples has advanced significantly during the last two decades, making possible the use of vast FFPE tissue archives in biomarker studies. However, due to the limited data regarding comparison of the performance of different protocols, there is currently no consensus on th...
ORGANISM(S): Homo sapiens (Human) 
2021-01-15 | PXD021074 | Pride
Ffpe Rapigest Proteomics Fasp Protein extraction Biomarker Lc-ms/ms 
ProteomicsReproducible proteomics sample preparation for single FFPE tissue slices using acid-labile surfactant and direct trypsinization
Four single consecutive murine kidney tissue specimens were prepared with the direct trypsinization with RapiGest (DTR) approach or with the filter aided sample preparation (FASP) protocol using both 10k and 30k filter devices and analyzed by label-free, quantitative liquid chromatography – tandem m...
ORGANISM(S): Homo sapiens (Human) Mus musculus (Mouse) 
2018-08-15 | PXD006401 | Pride
Shotgun proteomics Archival tissue Rapigest Ffpe Fasp Biomarker discovery Label-free quantitation 
UnknownComparative evaluation of two methods for LC-MS/MS proteomic analysis of formalin fixed and paraffin embedded tissues.
Not available
S-EPMC7900714 | biostudies-literature
UnknownCritical comparison of sample preparation strategies for shotgun proteomic analysis of formalin-fixed, paraffin-embedded samples: insights from liver tissue.
Not available
S-EPMC4115481 | biostudies-literature
UnknownReproducible proteomics sample preparation for single FFPE tissue slices using acid-labile surfactant and direct trypsinization.
Not available
S-EPMC5838928 | biostudies-literature
UnknownComparison of Different Buffers for Protein Extraction from Formalin-Fixed and Paraffin-Embedded Tissue Specimens.
Not available
S-EPMC4651363 | biostudies-literature
ProteomicsDiscovery of potential early colorectal cancer biomarker
Differential analysis of proteomes originated from early lesion of colorectal cancer and colon control tissue using FFPE-FASPTM and Label free analysis using 2DnanoUPLC separation before analysis on a qTOF synapt HDMS G2 using ion mobility as supplementary separation dimension
ORGANISM(S): Homo sapiens (Human) 
2017-03-28 | PXD005735 | Pride
Pt2nm Early stage Ffpe-fasp Human colorectal cancer Pt1nm Label free 
UnknownLabel-free quantitative mass spectrometry from formalin-fixed paraffin-embedded samples of nasopharyngeal carcinoma: Preliminary results from a non-endemic European cohort of patients.
Not available
S-EPMC7358631 | biostudies-literature
ProteomicsThe proteome of localized prostate cancer, part 4
Proteome characterization of gland confined prostate tumors and non-malignant prostate tissue. Whole cell protein extracts were purified from FFPE radical prostatectomy specimens for a total of 28 tumor samples and 8 adjacent non-malignant prostate tissues. Associated ProteomeXchange identifiers: PX...
ORGANISM(S): Homo sapiens (Human) 
2016-06-01 | PXD004132 | Pride
Super-silac Sax Human Ffpe Q-exactive Fasp Prostate cancer 
ProteomicsThe proteome of localized prostate cancer, part 7
Proteome characterization of gland confined prostate tumors and non-malignant prostate tissue. Whole cell protein extracts were purified from FFPE radical prostatectomy specimens for a total of 28 tumor samples and 8 adjacent non-malignant prostate tissues. Associated ProteomeXchange identifiers: PX...
ORGANISM(S): Homo sapiens (Human) 
2016-06-01 | PXD004159 | Pride
Super-silac Sax Human Ffpe Q-exactive Fasp Prostate cancer 
Sort   by:  
 Page size