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TranscriptomicsDiscovering novel bile protection systems in Bifidobacterium breve UCC2003 through functional genomics
Tolerance of gut commensals to bile salt exposure is an important feature for their survival in and colonization of the intestinal environment. A transcriptomic approach was employed to study the response of Bifidobacterium breve UCC2003 to bile, allowing the identification of a number of bile-induc...
ORGANISM(S): Bifidobacterium breve UCC2003 
2011-12-16 | E-GEOD-31032 | biostudies-arrayexpress
TranscriptomicsTranscriptional effects of the IWR1 deletion
Analysis of the genome-wide transcrptional effects caused by the deletion of the IWR1 gene by comparing the transcriptional profile of a iwr1 mutant strain with the isogenic wild type strain when cells were exponentially grown in YPD medium. Three independent cultures for the wt and the iwr1 mutant...
ORGANISM(S): Saccharomyces cerevisiae 
2009-10-13 | E-GEOD-17303 | biostudies-arrayexpress
TranscriptomicsBile-inducible membrane protein mediates the bile resistance phenotype of Bifidobacterium breve UCC2003
Bbr_0838 from Bifidobacterium breve UCC2003 encodes a 683 residue membrane protein, that contains a permease domain displaying similarity to transporters belonging to the major facilitator superfamily, as well as a CBS (cystathionine beta synthase) domain. The high level of similarity to bile-efflux...
ORGANISM(S): Bifidobacterium breve UCC2003 
2012-02-20 | E-GEOD-31224 | biostudies-arrayexpress
UnknownA Brief Photocatalytic Study of ZnO Containing Cerium towards Ibuprofen Degradation.
Not available
S-EPMC8510120 | biostudies-literature
UnknownBlue LED-assisted bioreactor cultivation enhances carotenoid accumulation in Rhodotorula mucilaginosa LB-01.
Not available
S-EPMC12932285 | biostudies-literature
UnknownThe Synergic Effect of h-MoO3, α-MoO3, and β-MoO3 Phase Mixture as a Solid Catalyst to Obtain Methyl Oleate.
Not available
S-EPMC11551912 | biostudies-literature
ProteomicsOsteocytes are not able to eliminate intracellular S. aureus and serves as a main reservoir for osteomyelitis
The main reservoir for Staphylococcus aureus osteomyelitis is the bone tissue where this pathogen can persist and form small colony variants for long periods within osteoblasts and osteocytes. Recently the osteocytes were described as a main reservoir for this pathogen in bone tissue. However, the m...
ORGANISM(S): Homo sapiens (Human) 
2022-08-02 | PXD029440 | Pride
Osteoblasts Osteocytes Staphylococcus aureus Osteomyelitis 
TranscriptomicsExpression of MALT1 oncogene in mouse hematopoietic stem/progenitor cells recapitulates the pathogenesis of human MALT lymphoma
Comparison of gene expression profiling analysis of bone marrow isolated CD34+ cells from patients with MALT lymphoma vs. healthy individuals revealed a large number of differentially expressed genes that included NF-kB target genes, genes involved in inflamatory signalling and immunoglobulin genes,...
ORGANISM(S): Homo sapiens 
2012-07-09 | E-GEOD-34015 | biostudies-arrayexpress
TranscriptomicsExpression profiling of LSK cells from Bmi1 cKO mice in hematopoiesis versus LSK control cells from WT mice
Bmi1 is a protein member of PRC1 and plays a major role in the maintenance of gene repression. We are studying the role of Bmi1 in the context of hematopoietic stem cell aging. We used microarray to study the gene expression profile of LSK cells in relation to the knocking-out of Bmi1 in vivo LSK ce...
ORGANISM(S): Mus musculus 
2011-10-29 | E-GEOD-31404 | biostudies-arrayexpress
TranscriptomicsA mouse model of deregulation of the malt1 oncogene recapitulates the pathogenesis of human malt lymphoma [MALT dataset]
Attempts at modeling chromosomal translocations involving MALT1 gene, hallmarks of human mucosa-associated lymphoid tissue (MALT) lymphoma, have failed to reproduce the disease in mice. Here we describe a transgenic model in which MALT1 expression was targeted to mouse hematopoietic stem/progenitor ...
ORGANISM(S): Homo sapiens 
2012-07-09 | E-GEOD-25638 | biostudies-arrayexpress
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