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ProteomicsYeast response to protein misfolding induced by azetidine-2-carboxylic acid (AZC)
To identify proteins that interact with the yeast Tsa1 peroxiredoxin, we utilized an N-terminal Myc-tagged version of Tsa1 with a mutation in its resolving cysteineresidue (Tsa1-C171S) to trap and detect redox-dependent interactions. Yeast cells were left untreated, or treated with AZC or hydrogen p...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2021-09-10 | PXD023668 | Pride
Yeast Protein misfolding Peroxiredoxin 
UnknownBreast cancer survival in Soweto, Johannesburg, South Africa: A receptor-defined cohort of women diagnosed from 2009 to 11.
Not available
S-EPMC6127863 | biostudies-literature
TranscriptomicsTranscription profiling time series of mouse hippocampal neuronal cultures during development
The expression of components of the synapse proteome was examined in genome-wide transcriptome profiles of differentiating hippocampus neurons (from 0.25 to 16 days in vitro) and microelectrode arrays was used to correlate the gene expression with electrical activity.
ORGANISM(S): Mus musculus 
2007-02-26 | E-MEXP-878 | biostudies-arrayexpress
ProteomicsYeast eIF4G homogenic whole cell oxidative stress LC-MSMS
Translation initiation factor 4G (eIF4G) is an integral component of the eIF4F complex which is key to translation initiation for most eukaryotic mRNAs. Many eIF4G isoforms have been described in diverse eukaryotic organisms but we currently have a poor understanding of their functional roles and wh...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2023-10-24 | PXD041682 | Pride
Lc-msms Yeast S. cerevisiae Oxidative stress Whole cell 
UnknownFeasibility study of a multimodal prehabilitation programme in women receiving neoadjuvant therapy for breast cancer in a major cancer hospital: a protocol.
Not available
S-EPMC10961545 | biostudies-literature
TranscriptomicsAnalysis of the role of yeast Slf1p in translation of specific mRNAs during oxidative stress response
The mechanisms by which RNA-binding proteins control the translation of subsets of mRNAs are not yet clear. Slf1p is an atypical La motif containing protein (LARP). LARPs are members of a superfamily of RNA-binding proteins conserved across eukaryotes. We performed transcriptomics and RIP-Seq analys...
ORGANISM(S): Saccharomyces cerevisiae 
2015-05-01 | E-MTAB-2567 | biostudies-arrayexpress
TranscriptomicsAnalysis of the role of yeast Sro9p in controlling the translation of specific mRNAs
The mechanisms by which RNA-binding proteins control the translation of subsets of mRNAs are not yet clear. Sro9p is an atypical La motif containing protein (LARP). LARPs are members of a superfamily of RNA-binding proteins conserved across eukaryotes. We performed transcriptomics and RIP-Seq analys...
ORGANISM(S): Saccharomyces cerevisiae 
2015-05-01 | E-MTAB-2568 | biostudies-arrayexpress
ProteomicsYeast PKA holoenzyme and condensate targeted and label-free proteomics
Protein kinase A (PKA) is a conserved kinase essential for many biological processes linked to growth, development and metabolism. The PKA catalytic subunit is expressed as multiple isoforms in diverse eukaryotes; however, their contribution to ensuring specificity in response to environmental cues ...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2025-09-19 | PXD045310 | Pride
Holoenzyme Yeast Condensates Heat stress Pka isoforms 
UnknownThe Efficacy and Safety of Nutritional Supplements for Cancer Supportive Care: An Umbrella Review and Hierarchical Evidence Synthesis.
Not available
S-EPMC12764759 | biostudies-literature
TranscriptomicsTranscription profiling of Danio rerio livers following chronic waterborne copper exposure
Zebrafish exposed to 2 waterborne copper concentrations (8 & 15 ug/L) in softwater for 21 days. Fish were terminally sampled and livers extracted for RNA extraction and hybridization to micorarrays
ORGANISM(S): Danio rerio 
2009-09-01 | E-MEXP-2287 | biostudies-arrayexpress
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