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ProteomicsComprehensive XL-MS reveals parallel orientation and versatile conformations of plant HOP2/MND1
The HOP2/MND1 heterodimer is essential for meiotic homologous recombination in plants and other eukaryotes, and promotes the repair of DNA double strand breaks. The HOP2/MND1 dimer forms via the central, split coiled coils (CC1 and CC2) present in both proteins, and the resulting complex contains se...
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2015-11-05 | PXD001538 | Pride
Xl hop2 mnd1 cross link 
ProteomicsCharacterization of the NTSR1-Arr2 complex
An in vitro prepared NTSR1-Arr2 complex was stabilized by use of heterobifunctional crosslinker. Here we characterize the crosslinks observed upon photo-illumination of this complex.
ORGANISM(S): Homo sapiens (Human) 
2019-12-19 | PXD016224 | Pride
Arresin Gpcr Crosslinking 
ProteomicsProteome-Wide Photo-Crosslinking Enables Residue-Level Visualization of Protein Interaction Networks in vivo
Crosslinking mass spectrometry (XL-MS) is emerging as a unique method at the crossroads of structural and cellular biology, uniquely capable of identifying protein-protein interactions with residue-level resolution and on the proteome-wide scale. With the development of crosslinkers that can form li...
ORGANISM(S): Escherichia coli 
2023-12-07 | PXD036884 | Pride
Heterobifunctional crosslinker Escherichia coli Xl-ms Diazirine Cleavable crosslinker Photo-crosslinking Proteome-wide Nhs-carbamate 
ProteomicsInvestigating the monomer-dimer transition of PKD1 kinase domain with EDC crosslinking
The project aim was to generate experimental constraints for the in silico modeling of the dimeric structure of the PKD kinase domain. And identify conformational changes upon dimerization. For this we used the heterobifunctional zero length crosslinker EDC to identify salt bridges within the protei...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD031997 | Pride
Protein kinase d Kinase domain dimer Activation loop ordering 
UnknownLight-Activated Triazabutadienes for the Modification of a Viral Surface.
Not available
S-EPMC5170875 | biostudies-literature
ProteomicsA complimentary benzophenone cross-linking/mass spectrometry photochemistry
We introduce a complimentary, heterobifunctional, photoactivatable, benzophenone containing cross-linker and show its successful application to cross-linking/mass spectrometry, by increasing data density, when used alongside a previously developed diazirine-based heterobifunctional cross-linker.
ORGANISM(S): Homo sapiens (Human) 
2017-04-26 | PXD004920 | Pride
Cross-linking/mass spectrometry  high-density data  complimentary chemistry  protein chemistry  human serum albumin 
UnknownExpanding the Crosslinking Mass Spectrometry Toolbox With Vinyl Sulfone Crosslinkers.
Not available
S-EPMC12682122 | biostudies-literature
ProteomicsExpanding the crosslinking mass spectrometry toolbox with vinyl sulfone crosslinkers
Crosslinking mass spectrometry (MS) is a powerful approach for probing protein structures. However, most widely used crosslinkers rely on N-hydroxysuccinimide (NHS) esters, restricting reactivity primarily to lysine residues and protein N-termini, and rendering them incompatible with many amine-cont...
ORGANISM(S): Homo sapiens (Human) 
2025-11-29 | PXD065869 | Pride
Mass spectrometry Vinyl sulfone Crosslinking 
ProteomicsExpanding the crosslinking mass spectrometry toolbox with vinyl sulfone crosslinkers
Crosslinking mass spectrometry (MS) is a powerful approach for probing protein structures. However, most widely used crosslinkers rely on N-hydroxysuccinimide (NHS) esters, restricting reactivity primarily to lysine residues and protein N-termini, and rendering them incompatible with many amine-cont...
ORGANISM(S): Homo sapiens (Human) 
2025-11-29 | PXD065858 | Pride
Mass spectrometry Vinyl sulfone Crosslinking 
ProteomicsExpanding the crosslinking mass spectrometry toolbox with vinyl sulfone crosslinkers
Crosslinking mass spectrometry (MS) is a powerful approach for probing protein structures. However, most widely used crosslinkers rely on N-hydroxysuccinimide (NHS) esters, restricting reactivity primarily to lysine residues and protein N-termini, and rendering them incompatible with many amine-cont...
ORGANISM(S): Homo sapiens (Human) 
2025-11-29 | PXD065859 | Pride
Mass spectrometry Vinyl sulfone Crosslinking 
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