Human ltq orbitrap velos

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Proteomics (1461)
Multiomics (63)
Metabolomics (45)
Unknown (17)
Other (8)

Organisms

Allexis (927)
Arabidopsis thaliana (927)
Callinectes sapidus (927)
Drosophila (927)
Drosophila melanogaster (927)
Ensifer adhaerens (927)
Entamoeba histolytica (927)
Escherichia coli (927)
Leishmania major strain Friedlin (927)
Listeria monocytogenes (927)
Medicago truncatula (927)
Methylohalobius crimeensis 10Ki (927)
Mus musculus (927)
Mycobacterium tuberculosis (927)
Oryza sativa Indica Group (927)
Physcomitrium patens (927)
Pseudomonas fluorescens WH6 (927)
Pseudomonas putida KT2440 (927)
Rattus norvegicus (927)
Saccharomyces cerevisiae (927)
Schizosaccharomyces pombe (927)
Schizosaccharomyces pombe 972h- (927)
Shigella (927)
Shigella flexneri (927)
Sinorhizobium meliloti BL225C (927)
Solanum tuberosum (927)
Staphylococcus aureus (927)
Trypanosoma brucei (927)
Homo sapiens (291)
Acanthoscurria juruenicola (1)

Repository

pride (927)
PeptideAtlas (279)
MassIVE (261)
GNPS (33)
MetaboLights (12)
jPOST (2)

Tissue

Cell culture (287)
Others (111)
Epithelial cell (103)
Digestive System (102)
Permanent cell line cell (61)
HeLa cell (32)
Fibroblast (31)
T cell (29)
Brain (28)
Blood (23)
Colonic cancer cell (22)
Rectal cancer cell (22)
Blood plasma (21)
Kidney (21)
Blood serum (19)
Plasma Non-glyco (16)
Female Reproductive System (13)
Male Reproductive System (8)
Large Intestine (6)
Brain (4)
Heart (3)
Liver (3)
Adrenal Gland (2)
Eye (2)
Kidney (2)
Lung (2)
Ovary (2)
Breast (1)
Spleen (1)
Urine (1)

Disease

Breast cancer (50)
Colon cancer (28)
Disease free (27)
Colon adenocarcinoma (21)
Rectum adenocarcinoma (21)
Melanoma (19)
Cervix carcinoma (13)
Acute leukemia (12)
Brain cancer (7)
Chagas disease (7)
Prostate adenocarcinoma (7)
Colorectal Carcinoma (5)
Chronic myeloid leukemia (5)
Head and neck squamous cell carcinoma (5)
Human immunodeficiency virus infectious disease (5)
Lymphoma (5)
Malignant neoplasm of ovary (5)
Glioblastoma (4)
Listeriosis (4)
Malaria (4)
Retinoblastoma (4)
Alzheimer's disease (3)
Brain glioblastoma multiforme (3)
Cardiovascular system disease (3)
Lung cancer (3)
Mixed disorder as reaction to stress (3)
Neck carcinoma (3)
Non-small cell lung carcinoma (3)
High Grade Ovarian Serous Adenocarcinoma (1)
Serous Cystadenocarcinoma (1)

Technology Type

Mass Spectrometry (927)
Shotgun proteomics (595)
Affinity purification coupled with mass spectrometry proteomics (190)
Gel-based experiment (105)
Bottom-up proteomics (81)
Data-dependent acquisition (23)
Top-down proteomics (21)
Chemical cross-linking coupled with mass spectrometry proteomics (18)
SRM/MRM (15)
Mass spectrometry (8)
Mass spectrometry assay (4)
Affinity proteomics (3)
All-ion fragmentation (2)
NMR spectroscopy assay (1)
Data-independent acquisition (1)
MSE (1)
Mass spectrometry imaging (1)
SWATH MS (1)

Instrument Platform

LTQ Orbitrap Velos (534)
Q Exactive (25)
LTQ Orbitrap Elite (23)
LTQ Orbitrap Velos Pro (14)
LTQ Orbitrap (11)
LTQ Velos (8)
MS:1000031 (8)
LTQ Orbitrap XL (6)
Orbitrap Fusion (6)
TripleTOF 5600 (4)
Q Exactive Plus (3)
Impact (2)
LTQ (2)
MaXis 4G (2)
Q Exactive HF (2)
Synapt G2-S HDMS (2)
6510 Quadrupole Time-of-Flight LC/MS (1)
Agilent 7890A GC coupled to a 5975C inert XL MSD (1)
Exactive (1)
LTQ Orbitrap Discovery (1)
LTQ Velos ETD (1)
LTQ XL (1)
LTQ-Orbitrap Velos,UltiMate 3000 Standard (SD) HPLC systems (1)
LTQ/Orbitrap Velos (1)
Orbitrap Eclipse (1)
Orbitrap Fusion Lumos (1)
Q Exactive GC Orbitrap (1)
Q Exactive HF-X (1)
Q Exactive HF-X hybrid quadrupole-Orbitrap (1)
Synapt G2 HDMS (1)

Publication Date

2014 (228)
2019 (145)
2016 (141)
2015 (125)
2018 (122)
2017 (121)
2022 (108)
2020 (95)
2021 (86)
2023 (71)
2024 (53)
2013 (51)
2025 (49)
2026 (32)
2011 (31)
2012 (17)

UNIPROT ID/AC

A5A3E0 (278)
B4E3A4 (278)
I3L4N8 (278)
P0CG38 (278)
P60709 (278)
P63261 (278)
P0CG39 (275)
P04406 (274)
P08238 (274)
Q58FF7 (274)
P07900 (273)
P62258 (273)
Q9BYX7 (273)
P06733 (272)
P11142 (272)
P21333 (272)
P21333-2 (272)
P68032 (272)
P68133 (272)
P68363 (272)
Q14568 (272)
Q58FF8 (272)
Q5HY54 (272)
Q9BQE3 (272)
B4DRV9 (271)
P07195 (271)
Q13748 (271)
Q71U36 (271)
P62736 (270)
P63267 (270)

ENSEMBL ID

ENSG00000170477 (233)
ENSG00000229353 (111)
ENSG00000147251 (72)
ENSG00000247315 (52)
ENSG00000204131 (11)
ENSG00000176092 (3)
ENSG00000214897 (2)

CHEBI ID

CHEBI:18186 (5)
CHEBI:27432 (3)
CHEBI:18428 (2)
CHEBI:28849 (2)
CHEBI:3293 (2)
CHEBI:28879 (2)
CHEBI:16239 (2)
CHEBI:40666 (2)
CHEBI:28847 (2)
CHEBI:60961 (2)
CHEBI:32080 (2)
CHEBI:80845 (2)
CHEBI:16630 (2)
CHEBI:28877 (2)
CHEBI:28870 (2)
CHEBI:28873 (2)
CHEBI:15937 (2)
CHEBI:3413 (2)
CHEBI:28788 (2)
CHEBI:28853 (2)
CHEBI:28850 (2)
CHEBI:74340 (2)
CHEBI:18026 (2)
CHEBI:30778 (2)
CHEBI:84662 (2)
CHEBI:84665 (2)
CHEBI:85726 (2)
CHEBI:28861 (2)
CHEBI:28327 (2)
CHEBI:16778 (2)

Metabolite Name

Tyrosine (3)
Paeonol (2)
Nordihydroguaiaretic acid (2)
Lactulose (2)
Lactose (2)
Galactose (2)
Esculin (2)
Hexadecanoic acid (2)
Naringenin (2)
Luteolin (2)
Kaempferol (2)
Pyroglutamic acid (2)
Coniferyl aldehyde (2)
Syringic acid (2)
O-Acetyl-L-homoserine (2)
Benzoic acid (2)
Pantothenic acid (2)
Salidroside (2)
Phenylalanine (2)
Octadecanoic acid (2)
Maltose (2)
Glutamine (2)
Azelaic acid (2)
Pyridoxal (2)
Sucrose (2)
Tryptophan (2)
Boivinide A (1)
K-Strophanthin-beta (1)
Quercetin 3-O-rhamnoside 7-O-glucoside (1)
Isovitexin 2''-O-beta-D-glucoside (1)

Modification

15.994915 (9)
57.021464 (7)
+3amu) (5)
42.010565 (5)
4x(15)N labeled L-arginine (5)
2x(15)N labeled L-lysine (4)
-17.026549 (3)
Not available (3)
32.056407 (2)
45.029395 (2)
-18.010565 (1)
0.984016 (1)
27.994915 (1)
28.0313 (1)
3'' (1)
4 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
56.026215 (1)
59.036279 (1)
6x(2)H labeled dimethylated L-arginine (1)
79.966331 (1)
MTRAQ heavy (1)
N6 (1)
N6-dimethyl-L-lysine (1)

Release Date

2013 (4)
2015 (3)
2011 (3)
2012 (2)
2022 (1)
2020 (1)
2019 (1)
2017 (1)
2014 (1)

Lab affiliation

Vanderbilt University (22)
EDyP (14)
McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University, Baltimore, Maryland 21205 USA (7)
Instituto de Biotecnología, Grupo de Bioquímica y Parasitología Molecular, Departamento de Parasitología, Universidad de Granada, Granada, Spain. (6)
BioArCh, University of York, UK (5)
Core Facility for Medical Bioanalytics Proteomics Platform Tübingen (PxP) Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen Elfriede-Aulhorn-Str. 7 D-72076 Tuebingen. Germany. (5)
IGMM, CNRS, Univ Montpellier, Montpellier, France (5)
IGMM, CNRS, Université de Montpellier, Montpellier, France (5)
Texas Tech University (5)
UMR 7367 CNRS-UL IMoPA Biopôle de l'Université de Lorraine Campus Brabois-Santé 9 avenue de la forêt de Haye 54505 Vandoeuvre-les-Nancy FRANCE (5)
Department of Molecular Biology, Princeton University, USA (4)
Greehey Children’s Cancer Research Institute, The University of Texas Health Science Center (4)
Wellcome Trust Sanger Institute (4)
BK21 FOUR Community-Based Intelligent Novel Drug Discovery Education Unit, College of Pharmacy and Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea (3)
Breast Cancer Now The Institute of Cancer Research (3)
DIMEVET Università degli Studi di Milano (3)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN 55905 (3)
Dept. of Oncology-Pathology, Karolinska Institutet, Stockholm, Sweden; Clinical proteomics mass spectrometry, Science for Life Laboratory, Sweden. (3)
Donnelly Centre for Cellular and Biomolecular Research, Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada (3)
Functional Genomics, University Medicine Greifswald, Germany (3)
GlycoProteomics Laboratory, Department of Parasitology, Institute of Biomedical Sciences, University of Sao Paulo, Avenida Lineu Prestes 1374, CEP 05508-000, Sao Paulo, Brazil (3)
Institut für Mikrobiologie, Universität Greifswald, Felix-Hausdorff-Str. 8, 17489 Greifswald (3)
Institute of Biochemistry of the Romanian Academy (3)
Laboratory of Fungal Pathogenesis, Centre for DNA Fingerprinting and Diagnostics (CDFD), Hyderabad, India (3)
Medical bioanalytics Institute for ophthalmic research Eberhard-Karls-University Tuebingen (3)
Pathology - Lab & Genomic Medicine (LGM); Washington University School of Medicine (3)
RIMD, Osaka university,Japan (3)
Analytical Chemistry, Department of Chemistry – BMC and Science for Life Laboratory, Uppsala University, Box 599, 751 24 Uppsala, Sweden (2)
Blizard Institute, Centre for Genomics and Child Health, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, E1 2AT, UK (2)
CNIO (2)

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Immunodepletion plasma proteomics by tripleTOF 5600 and Orbitrap elite/LTQ-Orbitrap Velos/Q exactive mass spectrometers.

Not available

S-EPMC3817719 | biostudies-literature

In-depth analysis of the chicken egg white proteome using an LTQ Orbitrap Velos.

Not available

S-EPMC3041730 | biostudies-literature

Host response profile of human brain proteome in toxoplasma encephalitis

Frontal cortex brain tissues obtained from 5 toxoplasma encephalitis patients and 5 controls were used for protein extraction. Protein amount was normalized on 10% SDS-PAGE, equal amount of protein from 5 patients and 5 controls were pooled separately and subjected to reduction, alkylation and try...

ORGANISM(S): Homo sapiens (Human)

2016-05-09 | PXD000261 | Pride

Differential alteration of plant functions by homologous fungal candidate effectors

Rust fungi are plant pathogens that cause epidemics which threatens the production of many important plant species, such as wheat, soy, coffee and poplar. Melampsora larici-populina (Mlp) causes the poplar rust and encodes at least 1184 candidate effectors (CEs), however their functions are poorl...

2020-12-03 | MTBLS2096 | MetaboLights

Human dental calculus LC-MS/MS

The purpose of this study was to investigate oral microbiome and host proteins in archaeological human dental tissues using a shotgun proteomics approach. The research focuses on dental calculus (mineralized plaque), dentine, a carious lesion, and an alveolar bone abscess from the medieval site of D...

ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human) Ovis

2014-01-29 | PXD000412 | Pride

Human Caries Ltq-orbitrap velos Cementum Maxis uhr-qq-tof Medieval Dentine Dental calculus Cattle Abscess Bone Dental plaque Q-exactive hybrid quadrupole orbitrap Sheep Archaeological Periodontitis

Optimizing chromatographic conditions for orbitrap-based MS platforms

We compared the performance of multidimensional protein identification (MudPIT) on Velos Pro Orbitrap (VPO) and Velos Orbitrap Elite (VOE) mass spectrometers to single dimension reversed phase (RP) chromatography on a Q Exactive Plus (QE+) and an Orbitrap Fusion™ Lumos™ (OFL). Using a digested HeLa...

ORGANISM(S): Homo sapiens (Human)

2019-03-04 | PXD009875 | Pride

Reproducibility Data-dependent acquisition Chromatography Q exactive Fusion lumos Human Pearson product-moment correlation coefficient Distributed normalized spectral abundance factor Orbitrap Quantitative proteomics Multidimensional protein identification technology

Impact of collection conditions on the metabolite content of human urine samples as analyzed by liquid chromatography coupled to mass spectrometry and nuclear magnetic resonance spectroscopy (LC-MS assay)

There is a lack of comprehensive studies documenting the impact of sample collection conditions on metabolic composition of human urine. To address this issue, two experiments were performed at a three-month interval, in which midstream urine samples from healthy individuals were collected, pooled, ...

2014-12-18 | MTBLS148 | MetaboLights

Characterization of breast cancer interstitial fluids by TmT labeling, LTQ-Orbitrap Velos mass spectrometry, and pathway analysis.

Not available

S-EPMC3562392 | biostudies-literature

Direct evidence of milk consumption from ancient human dental calculus, northern Europe

This study investigated the consumption of milk products in the archaeological record, utilizing human dental calculus as a reservoir of dietary proteins from archaeological samples from across Eurasia. Protein extraction and generation of tryptic peptides from dental calculus was performed using a ...

ORGANISM(S): Homo sapiens (Human)

2015-02-25 | PXD001361 | Pride

Human Beta-lactoglobulin Dental calculus Dental plaque Lc-ms/ms

CML proteome analysis, LTQ Orbitrap Velos

Using mass spectrometry the proteomes of CML were compared to normal tissue.

ORGANISM(S): Homo sapiens (Human)

2016-06-03 | PXD001502 | Pride

Cd34+ Shotgun proteomics Itraq Cml

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1531 Results

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