Hypercarb - OmicsDI

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Proteomics (17)
Metabolomics (16)
Unknown (7)

Organisms

Schizophyllum commune H4-8 (17)
Mycobacterium tuberculosis SP7 (17)
Oryza sativa Japonica Group (17)
Candidatus Endoriftia persephonae (17)
Mycobacterium tuberculosis SP10 (17)
Mycobacterium tuberculosis SP13 (17)
Mycobacterium tuberculosis SP22 (17)
Enterobacter ludwigii (17)
Chlamydomonas reinhardtii (17)
Lama (17)
Pyricularia oryzae P131 (17)
Enterococcus mundtii CRL35 (17)
Oncorhynchus tshawytscha (17)
Pseudomonas canadensis (17)
Strongylocentrotus purpuratus (17)
Influenza A virus (A/California/04/2009(H1N1)) (17)
Homo (17)
Pseudomonas aeruginosa PAO1H2O (17)
Human alphaherpesvirus 1 strain 17 (17)
Quercus petraea (17)
Canis lupus (17)
Mycobacterium tuberculosis SP1 (17)
Marchantia polymorpha subsp. ruderalis (17)
Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821 (17)
Curtobacterium pusillum (17)
Methylocystis sp. (17)
Exiguobacterium sp. SH31 (17)
Palaemonetes sp. common grass shrimp associated circular virus (17)
Amaranthus tricolor (17)
Spirochaeta sp. ELBA (17)

Repository

pride (17)
MetaboLights (16)

Tissue

Cell culture (3)
Endometrial cancer cell line (1)
Sputum (1)
Brain (1)
Cell suspension culture (1)
Leaf (1)
Lung (1)
Permanent cell line cell (1)
Liver (1)

Disease

Endometrial cancer (1)
Liver disease (1)
Malignant neoplasm of ovary (1)
Cystic fibrosis (1)

Technology Type

Mass Spectrometry (17)
Mass spectrometry (15)
Shotgun proteomics (9)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Mass spectrometry assay (1)
Glycoproteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Data-dependent acquisition (1)
Top-down proteomics (1)

Instrument Platform

Exactive (Thermo Scientific) (6)
Liquid Chromatography MS - positive - reverse phase (6)
ACQUITY TQD (Waters) (1)
2D Gas Chromatography MS – Positive (1)
Q-TOF Premier (Waters) (1)
DSQ II Trace Ultra (Thermo Scientific) (1)
LTQ Classic (Thermo Scientific) (1)
Liquid Chromatography MS - negative - reverse-phase (1)
Liquid Chromatography MS - positive - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2019 (9)
2024 (6)
2016 (4)
2025 (3)
2021 (3)
2020 (3)
2026 (2)
2023 (2)
2017 (1)

CHEBI ID

CHEBI:16704 (5)
CHEBI:17562 (4)
CHEBI:16750 (4)
CHEBI:21891 (4)
CHEBI:16335 (4)
CHEBI:17596 (4)
CHEBI:178090 (3)
CHEBI:20129 (3)
CHEBI:19229 (3)
CHEBI:19228 (3)
CHEBI:20794 (3)
CHEBI:19227 (3)
CHEBI:19062 (3)
CHEBI:69426 (3)
CHEBI:20607 (3)
CHEBI:17802 (3)
CHEBI:19065 (3)
CHEBI:16020 (3)
CHEBI:68467 (2)
CHEBI:178092 (2)
CHEBI:19688 (2)
CHEBI:178091 (2)
CHEBI:19068 (2)
CHEBI:27838 (2)
CHEBI:27410 (2)
CHEBI:19702 (2)
CHEBI:89487 (2)
CHEBI:18304 (2)
CHEBI:27748 (2)
CHEBI:15927 (2)

Metabolite Name

2'-O-methyluridine (3)
7-methylguanosine (3)
3-methylcytidine (3)
5-methylcytidine (3)
2'-O-methylguanosine (3)
2'-O-methylcytidine (3)
1-methylinosine (3)
1-methyladenosine (3)
2'-O-methyladenosine (3)
NAD (3)
Adenosine (3)
1-methylguanosine (3)
Inosine (3)
NR (2)
MeNam (2)
Nam (2)
NAAD (2)
ADPR (2)
NAMN (2)
NMN (2)
4-methylcytidine (2)
2-methylguanosine (2)
2'-O-methylinosine (2)
6-methyladenosine (2)
8-methyladenosine (2)
2-methyladenosine (2)
3-methyluridine (2)
5-methyluridine (2)
3-methylpseudouridine (2)
1-methylpseudouridine (2)

Release Date

2023 (2)
2021 (2)
2024 (1)
2014 (1)
2013 (1)

Lab affiliation

Cancer Biology Department, Fox Chase Cancer Center, Philadelphia, PA, USA (2)
European Molecular Biology Laboratory Heidelberg (1)
1Department of Chemistry, University of Wisconsin-Madison, Madison, WI 53706 USA 2School of Pharmacy, University of Wisconsin-Madison, 777 Highland Ave., Madison, WI 53705 USA (1)
BOKU University, Vienna, Austria (1)
University of Sheffield (1)
Kevin Pagel: Institute of Chemistry and Biochemistry, Freie Universität Berlin, Altensteinstraße 23A, 14195 Berlin, Germany. Fritz Haber Institute of the Max Planck Society, Faradayweg 4‑6, 14195 Berlin, Germany. Philipp Mertins (Philipp.mertins@mdc-berlin.de) : Max Delbrueck Center for Molecular Medicine in the Helmholtz Association, Berlin, Germany. Berlin Institute of Health (BIH), Berlin, Germany. (1)
PI/ PROFESSOR (1)
Future Industries' Institute, The University of South Australia (1)
Department of Physiology, Faculty of Pharmacy, University of Valencia, Burjassot, Valencia, Spain (1)
Temple University Lewis Katz School of Medicine, Philadelphia, Pennsylvania, United States (1)
Institut de Chimie des Milieux et des Matériaux de Poitiers (IC2MP), Université de Poitiers, CNRS, Equipe Eaux,Biomarqueurs, Contaminants Organiques, Milieux, (E-BiCOM), 4 rue Michel Brunet, TSA 51106, F-86073 Poitiers, France. (1)
Institute of Chemistry, Slovak Academy of Sciences, Bratislava, Slovakia (1)
University of Sheffield, Faculty of Engineering, Department of Chemical and Biological Engineering, UK (1)
Department of Chemical and Biological Engineering University of Sheffield Mappin Street, Sheffield S1 3JD United Kingdom (1)
Biomolecular Mass Spectrometry and Proteomics (1)
Department of Chemistry and Biomolecular Sciences, Macquarie University, Sydney, Australia (1)

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A large-scale metabolomics study to harness chemical diversity and explore biochemical mechanisms in ryegrass (HPLC-MS Hypercarb reverse phase NEG assay)

Perennial ryegrass (Lolium perenne) is integral to temperate pastoral agriculture, which contributes most of the milk and meat production worldwide. Chemical profiles and diversity of ryegrass offer several opportunities to harness specific traits and elucidate underlying biological mechanism...

2019-03-01 | MTBLS529 | MetaboLights

In-house packed porous graphitic carbon columns for liquid chromatography-mass spectrometry analysis of N-glycans

Although many reversed and normal stationary phases have been utilised for the separation of N-glycans, porous graphitic carbon (PGC) chromatography has become desirable because of its higher resolving capability, but is difficult to implement in a robust and reproducible manner. Herein, we demonstr...

ORGANISM(S): Bos taurus (Bovine) Homo sapiens (Human)

2021-07-08 | PXD024489 | Pride

LC-MS/MS separation and quantitation of ribavirin in chicken and comparison of different mass spectrometric platforms.

Not available

S-EPMC10408068 | biostudies-literature

Reconciliation of chemical, enzymatic, spectroscopic and computational data to assign the absolute configuration of the DNA base lesion spiroiminodihydantoin.

Not available

S-EPMC3886818 | biostudies-literature

Determination of Pentacyclic Triterpenoids in Plant Biomass by Porous Graphitic Carbon Liquid Chromatography-Tandem Mass Spectrometry.

Not available

S-EPMC10180310 | biostudies-literature

Quantitative HPLC-MS analysis of nucleotide sugars in plant cells following off-line SPE sample preparation.

Not available

S-EPMC3992224 | biostudies-literature

A dynamic histone-based chromatin regulatory toolkit underpins genome and developmental evolution in an invertebrate clade

The dynamic addition and removal of posttranslational modifications on eukaryotic histones define regulatory regions that play a central role in genome and chromatin biology. Here, we present the histone variation in the adult landscapes of histone posttranslational modifications, as revealed by qu...

ORGANISM(S): Capitella teleta Owenia fusiformis

2025-05-18 | PXD064021 | Pride

Annelids Histones

In-House Packed Porous Graphitic Carbon Columns for Liquid Chromatography-Mass Spectrometry Analysis of N-Glycans.

Not available

S-EPMC8226321 | biostudies-literature

Robust and Facile Automated Radiosynthesis of [<sup>18</sup>F]FSPG on the GE FASTlab.

Not available

S-EPMC8578107 | biostudies-literature

Direct Determination of Glyphosate and Its Metabolites in Foods of Animal Origin by Liquid Chromatography-Tandem Mass Spectrometry.

Not available

S-EPMC11311992 | biostudies-literature

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40 Results

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