Hypothetical proteins

Show results for

Unknown (1757)
Transcriptomics (194)
Genomics (141)
Proteomics (132)
Models (7)
Other (4)
Metabolomics (2)

Organisms

Homo sapiens (13)
Synechocystis sp. PCC 6803 (8)
Oryza sativa (8)
Helicobacter pylori (7)
Geobacter sulfurreducens (5)
Streptococcus pyogenes (5)
Escherichia coli (5)
Entamoeba histolytica (4)
Canis lupus familiaris (4)
Metallosphaera sedula (4)
Xylella fastidiosa (4)
Zea mays (4)
Staphylococcus aureus (4)
Allochromatium vinosum DSM 180 (3)
Listeria monocytogenes (3)
Escherichia coli str. K-12 substr. MG1655 (3)
Tetronarce californica (2)
Saccharomyces cerevisiae (2)
Neisseria meningitidis (2)
Gallus gallus (2)
Escherichia coli APEC O2 (2)
Thermotoga maritima (2)
Burkholderia pseudomallei K96243 (2)
Chlamydomonas moewusii (2)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (2)
Neisseria gonorrhoeae F62 (2)
Ehrlichia chaffeensis str. Arkansas (2)
mixed culture KAZ_0815 (1)
Cyanidioschyzon merolae (1)
Streptococcus pneumoniae R6 (1)

Organisms

Synechocystis sp. PCC 6803 (4)
Zea mays (4)
Plasmodium falciparum (4)
Homo sapiens (4)
Caulobacter vibrioides CB15 (2)
Metallosphaera sedula (2)
Mycobacterium leprae (2)
Anaplasma phagocytophilum (2)
Escherichia coli str. K-12 substr. MG1655 (2)
Eimeria acervulina (2)
Pseudomonas fluorescens (2)
Xylella fastidiosa (2)
Oryza sativa (2)
Staphylococcus aureus (2)
Streptococcus pyogenes (2)
Rickettsia rickettsii str. 'Sheila Smith' (1)
Thermococcus gammatolerans (1)
Paraburkholderia phymatum STM815 (1)
Streptococcus gallolyticus UCN34 (1)
Francisella tularensis subsp. tularensis SCHU S4 (1)
Neisseria gonorrhoeae F62 (1)
Haemophilus influenzae Rd KW20 (1)
Methylosinus trichosporium OB3b (1)
Ehrlichia chaffeensis str. Arkansas (1)
dechlorinating enrichment culture KB-1 (1)
Austropuccinia psidii (1)
Escherichia coli APEC O2 (1)
Thermotoga maritima (1)
Leishmania amazonensis (1)
Chlamydomonas moewusii (1)

Repository

ENA (132)
biostudies-arrayexpress (119)
geo (89)
pride (88)
jPOST (18)
MassIVE (8)
iProX (7)
BioModels (6)
PAXDB (6)
GPMDB (3)
MetaboLights (2)
Cell Collective (1)
PeptideAtlas (1)

Tissue

Cell culture (9)
Blood (4)
Brain (4)
Leaf (4)
Epithelial cell (3)
Plant cell (3)
Salivary gland (3)
Blood plasma (2)
Fat body (2)
Fungal asexual spore (2)
Head (2)
Heart (2)
Ovary (2)
Permanent cell line cell (2)
Pollen (2)
Posterior silk gland (2)
Testis (2)
Whole body (2)
Accessory sex gland (1)
Antenna (1)
Blood cell (1)
Bone (1)
Breast cancer cell (1)
Cardiac muscle cell (1)
Cell (1)
Cell suspension culture (1)
Embryo (1)
Flower bud (1)
Fruit (1)
T cell (1)

Disease

Not Available (3)
Breast cancer (2)
Tularemia (2)
Xoo inoculated (1)
Anemia (1)
Cryptococcosis (1)
Disease free (1)
Fungal infectious disease (1)
Lyme disease (1)
Malaria (1)
Prostate cancer (1)
Skin melanoma (1)
Trichomoniasis (1)

Technology Type

Mass Spectrometry (88)
Shotgun proteomics (51)
Bottom-up proteomics (16)
Gel-based experiment (12)
Affinity purification coupled with mass spectrometry proteomics (7)
Data-dependent acquisition (7)
Top-down proteomics (4)
Data-independent acquisition (2)
SRM/MRM (2)
SWATH MS (2)
Mass spectrometry assay (1)
Mass spectrometry (1)
Affinity proteomics (1)
Proteogenomics (1)

Instrument Platform

Instrument (3)
Illumina HiSeq 2000 (2)
Q Exactive Plus (2)
Illumina Genome Analyzer II (1)
Ion Torrent S5 XL (1)
Illumina HiSeq 1500 (1)
Easy-nLC 1000 UHPLC system (1)
LCQ Classic (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Orbitrap Fusion Lumos (1)
Xevo G2 Q-Tof (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - positive - reverse phase (1)
Liquid Chromatography MS - negative - reverse phase (1)
Unknown (1)
Bruker Autoflex II TOF/TOF (1)
Maldi-Tof-Tof (1)

Publication Date

2024 (33)
2010 (31)
2011 (28)
2012 (26)
2013 (24)
2008 (22)
2019 (21)
2022 (16)
2016 (14)
2026 (14)
2025 (14)
2021 (14)
2009 (13)
2020 (12)
2023 (11)
2017 (10)
2006 (10)
2018 (8)
2015 (7)
2014 (6)
2005 (6)
2007 (3)
2004 (1)

UNIPROT ID/AC

P20438 (2)
P20437 (2)
P53197 (2)
P26309 (2)
P32943 (2)
P30283 (2)
P24869 (2)
P38634 (2)
P24868 (2)
P24871 (1)
P40957 (1)
P24870 (1)
P00546 (1)
P38987 (1)
P08153 (1)
P11938 (1)
P06700 (1)
P38698 (1)
P40316 (1)
P47035 (1)
P11746 (1)
P40958 (1)
P07866 (1)
Q03018 (1)
P13365 (1)
P09119 (1)
P27636 (1)
Q00684 (1)
P26448 (1)
P33306 (1)

CHEBI ID

CHEBI:15355 (1)

Metabolite Name

Beta-Nicotinamide adenine dinucleotide phosphate (NADP) (1)
Guanosine diphosphate (GDP) (1)
Adenosine-5'-triphosphate (ATP) (1)
Adenosine-5'-diphosphate (ADP) (1)
Beta-Nicotinamide adenine dinucleotide (NAD) (1)
Thymideine-monophosphate (dTMP) (1)
Adenosine-3',5'-cyclic monophosphate (cAMP) (1)
1,4-Dihydronicotinamide adenine dinucleotide (NADH) (1)
UDP-Glucuronate (1)
2-Hydroxybutanoic acid (1)
Guanosine monophosphate (GMP) (1)
5-Amino-1,3,4-thiadiazole-2-thiol (1)
Cis-Aconitate (1)
N-Acetylglucosamine 1-phosphate (1)
N-Acetylglucosamine 6-phosphate (1)
2-Hydroxyglutarate (1)
D-Sedoheptulose 7-phosphate (1)
Uridine diphosphate glucose (1)
Gamma-Aminobutyric acid (1)
3-Phosphoglycerate (1)
6-Phosphogluconate (1)
UDP-N-acetylglucosamine (1)
Malate (1)
Oxidized glutathione (1)
Glucosamine 6-phosphate (1)
S-Adenosylmethionine (1)
Hydroxypropionic acid (1)
D-Glucose (1)
Histidine (1)
Glutamate (1)

First Public Date

2014 (52)
2025 (9)
2023 (9)
2024 (8)
2026 (7)
2013 (7)
2022 (6)
2019 (6)
2016 (6)
2021 (5)
2018 (5)
2017 (5)
2020 (4)
2015 (3)

Modelling Approach

Ordinary differential equation model (4)
Constraint-based model (2)

Lab affiliation

College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
College of Horticulture, Northwest A&F University (2)
Bavarian Center for Biomolecular Mass Spectrometry (BayBioMS), Technical University of Munich, Gregor-Mendel-Strasse 4, D-85354 Freising, Germany (1)
Bavarian Center for Biomolecular Mass Spectrometry Gregor-Mendel-Strasse 4 85354 Freising Germany (1)
Biotecnologia do Solo (1)
Boston College, Department of Biology, MA, USA (1)
Carlos Chagas Institute (ICC), FIOCRUZ/PR, Curitiba, Brazil (1)
Cedars-Sinai Medical Center, Heart Institute Advanced Clinical Biosystems Research Institute (1)
Center for Disease Control (1)
Center for Mechanisms of Evolution, Biodesign Institute, School of Life Sciences, Arizona State University, Tempe, Arizona, USA (1)
Center for Translational Research and Molecular Biology of Cancer, Maria Sklodowska-Curie National Research Institute of Oncology Gliwice Branch, Gliwice, Poland (1)
Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB, Campus UAB, 08193 Cerdanyola del Vallès, Barcelona, Spain. Institució Catalana de Recerca i Estudis Avançats (ICREA), 08010 Barcelona, Spain. (1)
Charles University, Faculty of Science, Department of Parasitology, BIOCEV Průmyslová 595, 252 42 Vestec, (1)
Chief Scientist, CSIR-Centre for Cellular and Molecular Biology, Hyderabad-500007, India (1)
China Jiliang University (1)
College of Agriculture/Hubei Key Laboratory of Waterlogging Disaster and Agricultural Use of Wetland, Yangtze University, Jingzhou, Hubei 434025, China (1)
DEPARTMENT of CHEMISTRY & CHEMICAL BIOLOGY HARVARD UNIVERSITY (1)
Departamento de Bioquímica Setor de Ciências Biológicas Centro Politécnico Universidade Federal do Paraná BRAZIL (1)
Departamento de Bioquímica, Instituto de Química, Universidade de São Paulo, Brazil (1)
Departamento de Microbiología II, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain (1)
Department of Biochemistry and Molecular Biology, University of British Columbia, Canada (1)
Department of Biology, Chair of Molecular Genetics and Microbiology, University of Ljubljana, Slovenia (1)
Department of Biology,Watson Building 207, MS #52, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA (1)
Department of Experimental Parasitology LMU München Lena-Christ-Str. 48 82152 Planegg-Martinsried Telefon: +49 (0) 89 2180 - 3622 Fax: +49 (0) 89 2180 - 3623 E-Mail: markus.meissner@lmu.de (1)
Department of Molecular Pathology and Biology Faculty of Military Health Sciences, University of Defence Trebesska 1575, 50001 Hradec Kralove, Czech Republic (1)
Department of Molecular Pathology, Faculty of Military Health Sciences, University of Defense, Hradec Kralove, Czech Republic (1)
Department of Parasitology, Faculty of Science, Charles University, BIOCEV, Prague, Czech Republic (1)
Department of Plant Sciences School of Life Sciences University of Hyderabad Hyderabad-500046, India. (1)
Division of Gene Technology, KU Leuven, B-3001 Leuven, Belgium (1)
Dr. Andreas Otto Institute for Microbiology Department of Microbial Proteomics Ernst-Moritz-Arndt-University Greifswald F.-L.-Jahn-Str. 15 17489 Greifswald phone: +49 3834 4205920 fax: +49 3834 4205902 (1)

IsPrivate

False (6)

Model Flag

Non Kinetic (1)

Submitter Keywords

FROG (1)

Classification

bacteria (37)
protozoa (8)
fungi (1)

Modification

Not available (1)

Study type

Transcription profiling by array (89)
Comparative genomic hybridization by array (6)
RNA-seq of coding RNA (6)
Unknown experiment type (5)
Transcription profiling by tiling array (4)
Proteomic profiling by array (3)
DNA-seq (2)
Transcription profiling by SAGE (1)
Genotyping by array (1)
ChIP-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2022 (138)
2018 (103)
2011 (100)
2021 (99)
2020 (99)
2012 (96)
2017 (95)
2013 (95)
2023 (95)
2019 (93)
2014 (92)
2015 (86)
2016 (83)
2010 (80)
2025 (75)
2024 (73)
2008 (64)
2009 (60)
2005 (47)
2007 (44)
2006 (42)
2004 (22)
2002 (21)
2001 (19)
2003 (16)
1999 (11)
1998 (11)
2026 (10)
2000 (5)
1997 (1)

Previous page
1 / 224
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 224
Next page

Sort by:

Relevance

Page size

Characterization of Hypothetical Proteins Reveals Function Modules and Virulence Factors in Pseudomonas aeruginosa

PRJNA1078725 | ENA

Gene expression profiling in the human pathogenic dermatophyte Trichophyton rubrum during growth on proteins

Dermatophytes are highly specialized filamentous fungi which cause the majority of superficial mycoses in humans and animals. The high secreted proteolytic activity of these microorganisms during growth on proteins is assumed to be linked with their particular ability to exclusively infect keratiniz...

ORGANISM(S): Trichophyton rubrum

2008-12-30 | E-GEOD-11711 | biostudies-arrayexpress

Systematic identification of hypothetical bacteriophage proteins targeting key protein complexes of Pseudomonas aeruginosa

Addressing the functionality of predicted genes remains an enormous challenge in the post-genomic era. A prime example of genes lacking functional assignments are the poorly conserved, early expressed genes of lytic bacteriophages, whose products are involved in the subversion of the host metabolism...

ORGANISM(S): Pseudomonas aeruginosa PAO1

2014-09-09 | PXD001199 | Pride